Xanthomonas oryzae pv. oryzae KACC 10331: XOO1064
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Entry
XOO1064 CDS
T00235
Symbol
dnaX
Name
(GenBank) DNA polymerase III tau and gamma subunits
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03030
DNA replication
xoo03430
Mismatch repair
xoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XOO1064 (dnaX)
03430 Mismatch repair
XOO1064 (dnaX)
03440 Homologous recombination
XOO1064 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoo03032
]
XOO1064 (dnaX)
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO1064 (dnaX)
Enzymes [BR:
xoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XOO1064 (dnaX)
DNA replication proteins [BR:
xoo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XOO1064 (dnaX)
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XOO1064 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
ResIII
AAA_18
AAA_7
PIF1
Mg_chelatase
nSTAND3
AAA_19
TsaE
AAA_24
AAA_2
SKI
Motif
Other DBs
NCBI-ProteinID:
AAW74318
UniProt:
Q5H403
LinkDB
All DBs
Position
1086888..1088984
Genome browser
AA seq
698 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDLSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLMQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGTTAGGGARSAAAGGQAAAPALAAPVTAAPPMVAATAAVTDTMPVAAAE
ASLPASATQATPTPAAAPAPAPVVMLPPQESSSPSRASAASARIDDTPPWAVDDAPVRTQ
ATTASDTMAVLAPEAAMASPSSAPVELAQPVAIASDAAEDAPVSVATSSPAALVEPSSFA
EPAVVTPPATAVSAADSAADASALLDDGCIADAEQWLELVTRSGLNGPSRQLAANAAFIG
HRDGVLRLALAPGFEYLHSERSIANLAQALAPVLGNTPRIVIETGSADVETLHERANRQK
GERQSAAETAFMNDPTVQLLIQQQGARIVPDSIRPYDE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgcggcgtgggcaagaccaccattgcgcgcatcttcgccaag
tcgctcaactgcgagaccggtacaagtgccgacccatgcggccagtgcccggcctgcctg
gacatcgacgccggtcgttacatcgacctgctggagatcgatgccgcgtccaacaccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagttc
aaggtttacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaatgcgctgctc
aagacgctggaagagccgccggagcacgtgaagttcctgctggctaccaccgacccgcag
aaattgccggtgacggtgctgtcgcgctgcttgcagttcaacctcaagcggctggacgag
gaccagattcagggccagatgacccgcatcctggccgccgagcagatcgaatcggatctg
tcggcgattgtgcagctgtccaaggcagccgacggctcgttgcgcgatggcctgtcgctg
ctggatcaggcgatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ttgggcacggtcgatcgcacccaggtcggcgcgatgctgcaatcgctggccgatggcgat
ggcgcgcgcctgatgcaggtcgtggccgcgctggctgagttttcgcccgattggagcggg
gtgttggaggccctggccgaggcgttgcatcgcgtgcaggtgcagcagctggtgccgtcg
gtggcctttgttggcgacggcatcgacccgactccttttgcggcgcagttgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcgtcgtgatctgtatctggcgccc
agtccgcgcgctggcttcgagatggcagtgctgcgcatgctcgccttccgccccgctgcg
gcggtgccggctggcggctcggacgacggacgcggcaccacggcgggcggtggtgcgcgt
tctgccgctgccggcggtcaggctgctgcgccggcactggcagcgccggtgacagctgcg
ccccccatggtggccgcgactgctgcggtgacggatacgatgcctgtggcggcggcggag
gcgtccctgccggcatccgcgacccaggcaactccgactccggccgcagctccggcgccg
gctcccgttgtcatgcttcctccccaagaatcttcttcgcccagtcgcgcgtctgcagcc
agcgcgcgcattgacgacacgccgccgtgggcagtggacgatgcgccggtgcgcacgcag
gccacaactgcgtccgacacgatggccgtgcttgcgcctgaagccgcgatggcttcgccg
tcgtccgcacccgtcgagctcgcacaacccgttgcgatcgcgtccgacgccgcagaggac
gctccggtttcggttgcaacatcttcgccggccgcgcttgtcgagccctcatcgtttgca
gagccagcagtggtcacgccaccagcaacggcagtatccgcagcagactcagcagccgat
gcatcggctttgctcgacgacggctgtatcgccgatgccgagcaatggctggagctggtc
acgcgcagtggcttgaatggaccgtcgcggcagctggccgccaacgccgcgtttatcggt
catcgcgatggcgtgctgcggctggcgctggcgccgggttttgaatatctccattccgag
cgctccatcgccaacctcgcgcaggcgttggcaccggtgttgggaaacacgccgcgcatc
gtcatcgaaaccggtagcgccgatgtcgaaaccttgcacgagcgtgccaaccgccagaaa
ggcgagcgccagagcgcggccgaaacagcctttatgaacgacccgacggtgcagctgctg
atccagcagcaaggcgcgcggatcgtccccgattccatccgcccttacgacgagtaa
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