Xanthomonas oryzae pv. oryzae KACC 10331: XOO1148
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Entry
XOO1148 CDS
T00235
Symbol
rpoZ
Name
(GenBank) RNA polymerase omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XOO1148 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xoo03021
]
XOO1148 (rpoZ)
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO1148 (rpoZ)
Enzymes [BR:
xoo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XOO1148 (rpoZ)
Transcription machinery [BR:
xoo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XOO1148 (rpoZ)
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XOO1148 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AAW74402
UniProt:
Q5H3R9
Structure
PDB
PDBj
LinkDB
All DBs
Position
1170580..1170912
Genome browser
AA seq
110 aa
AA seq
DB search
MRGRCWSPGARMARITVEDCLEVVNNRFELVMMASKRARQLANGVQPLIENAAASDKPTV
MALREIAARRIDNALIDEVEKAERERAEREALEWAAAEVVADEDMSKNDD
NT seq
333 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggccgttgctggtcgccgggagcccgcatggcccgcattaccgtagaagattgc
ctggaagtcgtgaacaaccgttttgagctggtcatgatggcctccaagcgcgcccgtcag
ctcgccaacggcgtacagccgctgatcgaaaatgccgctgccagcgacaagcccaccgtg
atggcgctgcgcgagatcgccgcacgccggatcgataatgcgctgatcgacgaagtcgag
aaggccgagcgcgaacgtgccgagcgcgaagcgttggagtgggccgccgccgaagtggtc
gccgacgaagacatgtccaagaacgacgattga
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