Xanthomonas oryzae pv. oryzae KACC 10331: XOO1354
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Entry
XOO1354 CDS
T00235
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00300
Lysine biosynthesis
xoo00470
D-Amino acid metabolism
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01120
Microbial metabolism in diverse environments
xoo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XOO1354 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XOO1354 (lysA)
Enzymes [BR:
xoo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XOO1354 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6401
Motif
Other DBs
NCBI-ProteinID:
AAW74608
UniProt:
Q5H363
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All DBs
Position
complement(1377590..1378870)
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AA seq
426 aa
AA seq
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MAARRPPIRLHRAAQSHRPHHHGAAGGSMSLRIDTAAALAALPHVRDRCDGPICAYVYDL
AALDAHAAWMRAQLPAQCELFYAAKANAEPPILQTLAAHVDGFEAASGGELAWLHAQQPQ
APLLFGGPGKLDTELAQAAALPDCTVHVESLSELERLAAIAAHAGRCVPVFLRMNIAVPG
AQSTRLTMGGHPSPFGLDPDDLDAAMQLLQASPSLRLEGFHFHLMSHQRDAAAQLHLIAA
YLRTVQRWRHTYALGPLRVNAGGGFGVDYLAPESSFDWAGFCAGLPALLGEHGTDLRLRL
EPGRYVSASCGWYLMEVLDLKRSHGAWFAIARGGTHHFRTPAAQAHDHPFRVLRGARTPV
LRDTPVTLVGQLCTPKDVLARDQSVAALAPGDCLAFPLAGAYAWTISHQHFLMHPAPQMV
FLPAKK
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcgcgccgaccgccaatccgactacaccgcgctgcccaatcccatcgcccgcat
caccacggcgcggcaggtggcagcatgagtctgcgcatcgacaccgccgcggcgcttgcg
gccttgccgcacgtgcgcgaccgctgcgatggcccgatctgcgcatacgtctacgacctg
gcggcattggacgcacacgcggcctggatgcgcgcacagctgccggcgcagtgcgagctg
ttctatgcagcaaaagccaacgcagaaccgccgattctgcaaacgctggcagcacatgtg
gatggcttcgaagccgcatccggcggcgaactcgcctggctgcatgcgcagcaaccgcag
gcaccgttgttgttcggtggcccgggcaaactcgataccgagctcgcccaggcagccgcc
ctgcccgactgcacggtgcatgtggaaagcctgagcgaactcgaacgcctggcggcaatt
gccgcgcacgccggccgctgcgtgccggtgttcctgcgcatgaatatcgccgtacccggc
gcgcagagcacacgcctgacgatgggcgggcatccctcgccgttcggtctggacccggac
gatctggatgcagcgatgcagctgctgcaggcaagcccatcgctgcgcctggaaggcttc
cacttccatctgatgtcgcatcaacgcgatgccgctgcacaactgcatctgatcgccgct
tacctgcgcactgtgcagcggtggcggcatacctatgcgctgggcccattgcgggtcaat
gccggcggcggcttcggggtggactatctggcgccggaatcgtcgttcgattgggccggc
ttctgtgccgggctaccggccctgctgggcgaacatggcacagacctgcgcctgcgcctg
gaaccgggccgctatgtcagcgccagctgcggctggtatctgatggaagtgctggatctc
aaacgcagtcacggcgcctggtttgcgatcgcacgtggcggcacccaccacttccgcacc
ccggccgcacaggcgcacgatcacccattccgtgtgttgcgtggggcacgtacgccggtg
ctgcgcgatacgccggtcaccctggtcgggcagttgtgcacacccaaggatgtgctggca
cgtgatcaatccgtcgccgcgctggcaccgggtgattgcctggcttttccgctggccggc
gcctatgcatggactatttcgcaccagcactttctgatgcatccggcaccgcagatggtg
tttttgccagcgaagaagtga
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