Xanthomonas oryzae pv. oryzae KACC 10331: XOO1539
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Entry
XOO1539 CDS
T00235
Symbol
ada
Name
(GenBank) DNA methylation and regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XOO1539 (ada)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xoo03000
]
XOO1539 (ada)
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO1539 (ada)
Enzymes [BR:
xoo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
XOO1539 (ada)
Transcription factors [BR:
xoo03000
]
Prokaryotic type
Helix-turn-helix
AraC family
XOO1539 (ada)
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XOO1539 (ada)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
AAW74793
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All DBs
Position
complement(1571684..1573147)
Genome browser
AA seq
487 aa
AA seq
DB search
MQIATPDRTQCDRARLARDARFDGLFLTAVRSTGIYCRPVCPAPPPKPANVSDYPTAAAA
SAAGYRPCLRCRPELSPQAQQHLGEESVQRALAMIADGALQEQPVQTLSDAVGLSARQLQ
QQFVQQLGATPIQVHGTHRLLLAKQLLTETALPVTEVALAAGFNSLRRFNAAFLQGCGMP
PSALRKQRAEVPGGELTLRLGYRPPLDLPAMLAFLQRRAIPGIEQVDASGDRRVTGPPGK
ASVIGVSAAPQRAELLLRIGATDPRQIPQSGRRVRRLFDLDADLQAVPATLAPDPLLAEA
IARRPGLRVPGGWDGFEVAVRAVLGQQISAAGAATLAARLVDPHGGHHTDMPPGLDRSFP
TPDQLADAPLEQLGLPRAGAATLRALASACAQGQLHCGAGQRLPDFLAACTALPGIGPWT
AHYLAMRALSHPDAFPAGDLILQQVLGAPERLSARATDARSQAWRPWRAFAVLHLWHLAN
DRKDTRA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgcgacgcccgaccgaacccaatgcgaccgtgcccgcctggcgcgcgatgca
cgtttcgacgggttgtttttgaccgccgtgcgcagcaccggcatctattgccgcccggtg
tgtccggcaccgccgccgaagccggccaatgtcagcgactaccccactgccgcggcggcc
agcgcggccggataccgcccgtgtctgcgctgccggccggagctgtcgccgcaggcgcag
cagcatctgggcgaagaaagcgtgcagcgcgcactggcgatgattgccgacggcgcgctg
caggagcagccggtgcagacgctgtccgatgcggtgggcttgagcgcgcgccagctgcag
cagcaattcgtgcaacagttgggtgccacgccgatccaggtgcacgggacgcatcggctg
ctgctggccaagcaattactcaccgaaaccgcactgccggtcaccgaggtggcgctcgca
gcaggcttcaacagcttgcggcggttcaatgcggccttcctgcagggctgcggcatgccg
ccttctgcactgcgcaagcagcgtgccgaggtgccgggcggcgagctcacactgcgcctg
ggctatcgcccgccactggatctgccggcgatgctggccttcttgcagcgccgtgcgatc
ccggggatcgagcaggtcgatgccagcggcgaccgtcgcgtgaccggcccgccgggcaag
gccagcgtgatcggcgtcagcgcggcgccgcagcgcgcggaactcctgctgcgcatcggg
gcgaccgacccacgccagattccgcagagcgggcggcgcgtgcgacggctgttcgatctg
gatgcggacttgcaagccgtgcccgcgacgcttgcgcccgacccactgctggccgaggca
atcgcacgccgaccaggcctgcgcgtgcccggtggttgggacggcttcgaggtggcggta
cgtgcggtgctgggccagcagatcagtgccgccggcgcggcgaccttggcggcgcggctg
gtggaccctcatggcggccatcataccgacatgccacctggactggatcgcagtttcccc
acgcccgaccagctggccgacgcgccactggaacaactcgggctaccgcgtgcgggcgcc
gccacgctgcgtgcgctggcatcggcttgcgcacaaggccagctgcactgcggtgccggg
cagcgtctgcccgacttcctcgccgcctgcaccgcgctacccggaatcgggccgtggacc
gcgcattacctggccatgcgtgcgttgtcgcatcccgatgcgtttccggctggcgatttg
atcctgcagcaggtgctcggcgcccccgagcgcctgagcgcgcgcgccaccgatgcacgt
tcgcaagcgtggcgaccgtggcgcgccttcgccgtgctgcacctgtggcatctggccaac
gaccgtaaggacacccgcgcatga
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