Xanthomonas oryzae pv. oryzae KACC 10331: XOO1597
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Entry
XOO1597 CDS
T00235
Symbol
rluD
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xoo03009
]
XOO1597 (rluD)
Enzymes [BR:
xoo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
XOO1597 (rluD)
Ribosome biogenesis [BR:
xoo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XOO1597 (rluD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AAW74851
UniProt:
Q5H2H0
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All DBs
Position
1640447..1641454
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AA seq
335 aa
AA seq
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MPVSMSDPSADPLDPSIRQAIVPDNAAGRRFDAVLAELFPEFSRSRLSEWIKSGDALLDG
AMARPRDTLRGGESVQVQVVLETQTHAAPQDIPLSVLYEDEQVLVIDKPAGLVVHPGAGN
PDGTLVNALLFRDPALASVPRAGVVHRLDKDTSGVMVLARTVQAQTALVEQLSARDVHRQ
YLAVVVGALVSGGTANAPIDRHPRDRLKMAVRDDGRDAVTHYRLRERFRAHTALECRLET
GRTHQIRVHMAHLKSPIVGDPLYGGALKLPKGATDELVHELRTFKRQALHAETLQFLHPV
SGEPVRASAPVPADLQRLMTALREDSARAAELARH
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgtgtccatgtccgacccatctgccgaccccctcgacccgtccatccgccaggcg
atcgtgcccgacaacgccgccggacgccgtttcgacgcggtgctggccgagttgttcccc
gaattctcgcgctcgcgactgtcggagtggatcaagtccggcgacgccctgctggacggc
gccatggcgcgcccgcgcgacaccttgcgcggcggcgagagcgtgcaggtgcaagtggtg
ctggagacccagacccatgccgcgccgcaggacatcccgctgagcgtgctgtacgaagac
gagcaggtgttggtgatcgacaagccggccggcctggtggtgcatccaggcgccggcaat
ccggacggcaccctggtcaatgcgctgctgtttcgcgaccctgcgctggcatcggtgccg
cgcgctggcgtggtgcatcgcctggacaaggacaccagtggcgtgatggtgttggcgcgc
accgtacaggcgcaaaccgcgctggtggagcagctgtccgcgcgcgatgtgcatcgccag
tacctggcggtggtggtgggggcgctggtctccggcggcactgccaatgccccaatcgac
cgtcacccgcgcgaccgcctgaagatggcggtgcgcgacgacggtcgcgatgcagtcacg
cattaccgcctgcgcgagcgcttccgcgcccacaccgcgctggagtgccgcctggaaacc
gggcgtacccatcagatccgcgtgcacatggcgcacctgaaatcgccgatcgtcggcgac
ccgctgtacggcggcgcgctcaagctgcccaagggcgccaccgacgagctggtgcacgaa
ctgcgcaccttcaagcgccaggcgctgcatgccgaaacgctgcaattcctgcatccggtc
agcggcgagccggtccgcgccagcgcgccggtgccggccgatctgcagcgcctgatgacc
gcgctgcgcgaagacagcgcacgcgccgccgagttggcacgccactga
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