Xanthomonas oryzae pv. oryzae KACC 10331: XOO1739
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Entry
XOO1739 CDS
T00235
Symbol
ponB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00550
Peptidoglycan biosynthesis
xoo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
XOO1739 (ponB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
xoo01003
]
XOO1739 (ponB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xoo01011
]
XOO1739 (ponB)
Enzymes [BR:
xoo01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
XOO1739 (ponB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
XOO1739 (ponB)
Glycosyltransferases [BR:
xoo01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
XOO1739 (ponB)
Peptidoglycan biosynthesis and degradation proteins [BR:
xoo01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
XOO1739 (ponB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AAW74993
UniProt:
Q5H228
LinkDB
All DBs
Position
1808886..1811330
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AA seq
814 aa
AA seq
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MPRRHDNDAPDDFEDDTNAQGSRWQRRLIVWGFAAFALALGFLIPYTVYLNKQVTQRFGE
LRWQIPTRVYGRPLVLVPGIALDAATLKTELDAASYSDDGQAKLPGTYQQDGSRFTIASR
GYIDVDGHVPARRIDVSLAGGRVATLRDAGDRKALESARLDPARIATLYGQKQEERRLVR
MEEVPELLVTGLQAVEDRDFNSHHGIDLSGMVRAAWIMARSGGQVRQGASTLTQQLARSG
LLGIGKEQTLTRKFNEILYAVIMEARYDKRTILEAYLNQVYLGQRGGQAIHGVSSGAELW
FGRELNSMTTEQIALLIGLVKGPSYYDPRRNPERALDRRNFVLGKLHENNLINDAEYKRA
LAAPLGVPTEPGLVAANRFPAYVDLVRRQLAHDYPEGVLQGAGMSVLTGMSPSAQAYAEG
AVTGTIKRLDNKKRPPLQAGLVLTDVHNGDVLAVVGSREVAKPGFNRAVEAQRQVGSLLK
PFVYMLALASPDRWALSSWVDDSPVTVQLSRGRTWSPGNSDNRSHGTVRLVDALAHSYNQ
ATVRVGMQVGADRIAQLIQVLAGIKAEPNPALILGTTDQSPYGMAQLYQFLAAGGEIQPL
HAVRGVLDPQGKLLKRYDKTPAPAQEGDSVAANLISIGLQQVVSNGTARQLLGDGLGRLS
SAGKTGTSNDGRDSWYAGYTGDHLAVIWMGNDQNAETGLYGATGAMRVWSSIFARLPSAP
LKVSGRGLDWQWVDASGTGVTDPGCPGARQFPFVVGFTPAYAPCAGNAPSIEAAPGEAAA
PAEQSSGGGWRRFFGLEKKPEQPAPAPATAPPAH
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgacgccacgacaacgacgctcccgacgatttcgaggacgataccaacgcgcaa
ggctcccgctggcaacgcagactcatcgtctggggatttgccgcgttcgcgctggcgctc
ggtttcctgattccctatacggtatatctgaacaagcaggtcacccagcgcttcggcgag
ttgcgttggcagatcccgacccgcgtgtacgggcggccattggtgctggtgcccggcatc
gcgctggatgcggccacgctgaagaccgagctggatgcggcgtcgtacagtgacgacggt
caggcgaagctgcctggcacctatcagcaggacggcagccgcttcaccatcgccagccgc
ggctatatcgatgtggatgggcatgtgccggcgcgccgtatcgacgtcagcctggcgggc
gggcgcgtggccacgctgcgcgacgccggcgaccgcaaagcgctcgaaagcgcacgcctg
gacccggcgcgcattgccaccctgtacggccaaaagcaggaagaacgccgcctggtgcgc
atggaagaagtgcccgagctgctggtcaccggcctgcaggcggtggaagatcgcgacttc
aacagccaccacggcatcgatctgagtggcatggtgcgcgcggcctggatcatggcgcgc
tccggcggccaggttcgccagggtgccagcacgctgacccagcagttggcccgcagcggc
ctgctcggcatcggcaaggaacagacgctgacgcgcaagttcaacgagatcctgtacgcg
gtgatcatggaggcgcgttacgacaagcgcaccatcctggaggcctatctcaaccaggtg
tatctgggccagcgcggcgggcaggcgatccacggtgtgtcgtcgggcgccgagctgtgg
ttcggccgcgaactcaattcgatgaccaccgagcagatcgcgttgttgatcgggctggtc
aaggggccgtcgtactacgacccgcggcgcaacccggagcgcgcgctggaccggcgcaat
ttcgtgctcggcaagctgcacgaaaacaacctgatcaacgacgccgagtacaagcgcgcg
ctggccgcgccgctgggcgtgcccaccgagcccggcctggtcgcagccaatcgtttcccc
gcctatgtggacttggtgcggcgccagctggcgcacgattacccggaaggcgtcctgcag
ggcgccggcatgagcgtgctcacgggcatgtcgccgtctgcgcaggcgtatgccgaaggg
gcggtcaccggcaccatcaagcggctggacaacaagaagcgcccgccgctgcaggccggg
ctggtgctcaccgacgtgcacaacggcgatgtgctggcggtggtcggcagccgcgaggtg
gccaagccgggcttcaatcgtgcggtggaagcgcagcggcaggtgggctcgttgctcaag
ccgttcgtgtacatgctggcgctggcctcgccggaccgctgggcgctgtccagctgggtc
gacgactcgccggtcaccgtgcagctcagccgcggcaggacctggtcgcccggcaattcc
gacaaccgcagccacggcactgtgcgtctggtcgatgcgctggcgcattcctacaaccag
gccacggtgcgggtgggcatgcaggtcggcgcagaccgcatcgcgcaactgatccaggtc
ttggccggcatcaaggccgagcccaatccggccttgatcctgggcacgaccgaccagagc
ccgtatggcatggcgcagctttaccagttcctggcggccggcggcgagatccagccgctg
cacgcggtgcgcggtgtgctcgatccgcagggcaagctgctcaagcgctacgacaagacc
ccggcaccggcgcaggaaggcgattcggtggctgccaacctgatcagcatcggtctgcag
caggtagtcagcaacggtaccgcgcgccagctgctgggcgatggcctgggtcgcttgtcg
tcggccggcaagaccggtacctccaacgatggtcgcgacagttggtatgccggctatacc
ggcgaccacctggcggtgatctggatgggcaacgaccagaacgccgagaccggcctgtat
ggcgccaccggcgcgatgcgggtgtggtcgagcatcttcgcccgcctgccgagtgcgcca
ttgaaggtcagcggcagaggcctggattggcagtgggtggacgccagcggtaccggcgtg
accgaccccggttgcccgggcgcgcgccagttcccgttcgtggtcggcttcacgccggcc
tacgccccgtgtgccggcaatgcaccatcgatcgaagctgcgcccggcgaagcggccgca
cccgccgaacaatccagcggcggtggctggcgccgcttcttcggtctggaaaagaagccc
gaacaacccgccccggcgcctgccacggccccaccggcgcattga
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