Xanthomonas oryzae pv. oryzae KACC 10331: XOO1835
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Entry
XOO1835 CDS
T00235
Name
(GenBank) Alpha-L-fucosidase
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00511
Other glycan degradation
xoo04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
XOO1835
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
XOO1835
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xoo04147
]
XOO1835
Enzymes [BR:
xoo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
XOO1835
Exosome [BR:
xoo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
XOO1835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
F5_F8_type_C
F5_F8_type_C_2
CBM_AftD
TAT_signal
DUF3999
GHL6
Motif
Other DBs
NCBI-ProteinID:
AAW75089
UniProt:
Q5H1T2
LinkDB
All DBs
Position
1933766..1935697
Genome browser
AA seq
643 aa
AA seq
DB search
MIDRRTFLATGVAAAAAASVSASAARIAQTPRANGPAPWGAVPSARQLRWHRWEQYAFVH
FAMNTFIDKEWGYGDEDPRKFDPSDFSADQIVAAAKAGNLKGLIFTAKHHDGFCLWPTRL
TEHCIRNSPYKNGKGDIVGEMAAACRRAGLAFGLYLSPWDRNHAEYGRPGYIDYFRKQIV
ELCTGYGDLFEFWFDGANGGDGYYGGARESRKIDAPAYYNWPRMIGLVHQHQPMACTFDP
LGADIRWGGNEDGIAGDPSWPTMPNAPYTQENGNSGVRGGALWWPAETNTSIRPGWFYHA
DEDGKVRSPENLVRYFDTSVARGTNMNLNLPPDRRGRIPDHDVAVLQSFGDAIRASFAID
LAKGAKATASASRGPGFEPSRVLDRQPDSYWSTPDDVTTPTLTLELPTAHSFDLIRLREY
LPLGVRVTRFAVEAEVDGQWRRLAEAQCIGAQRIVRLDRPIAARRVRLVVLEAPVCPAIT
EFALFRAVAPVLVARPTANAPDVLSTAGWRIVEASAPGAETLLDDDASTLWITPAPTPGH
PVQATIDLGALRKVAGFSLTPSRAVMTGAAPPKGYRAETSEDGQHWQPAGAGELSNIAYA
LSTQRLNFPEVRQIRYLRLSFAETAVPAERLAIAGIGAFSRLR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatcgatcgtcgtacctttcttgccacgggcgtggcggcggccgctgctgccagcgtc
agtgcatcggcggctcgcatcgcgcagacgccgcgcgccaacgggccggcaccgtggggg
gcagtgcctagcgcgcgccagctgcgctggcatcggtgggagcaatacgccttcgtgcat
tttgcgatgaacaccttcatcgacaaggaatggggctacggcgacgaagatccgcgcaaa
ttcgatcccagcgatttttcggccgaccagatcgtcgctgcggcaaaagcaggcaatctc
aaggggctgattttcacggccaagcaccatgatgggttctgtctgtggccgacacgcttg
accgagcactgcatccgcaactcgccgtacaagaacggcaagggtgacattgtcggggag
atggccgcggcatgtcgccgcgcgggtctcgcgttcggcctgtacctctcgccctgggat
cgcaaccatgccgagtatggtcgccccggttatatcgactatttccgcaagcagatcgtc
gagctctgcaccggctacggcgacctgttcgagttctggttcgacggtgccaatggcggc
gacggctattacggcggggcgcgcgaatcgcgcaagatcgatgcgcctgcgtactacaac
tggccgcggatgatcgggctggtgcaccagcatcagccgatggcatgtaccttcgatccg
ctgggcgctgatatccgctggggcggcaatgaagatggcatcgccggcgatccgtcctgg
ccgaccatgcccaatgccccgtacacccaggaaaacggcaattcgggcgtgcgcggcggg
gcgctgtggtggcctgccgaaaccaatacgtcgatccgcccgggctggttctaccacgcc
gatgaagacggcaaggtgcggagcccggagaatctggtgcgctatttcgacacctcggtg
gcgcgcggcaccaacatgaatctcaatcttccgcctgaccggcgcggccgcattcccgac
cacgacgtggcggtgctgcagagtttcggcgacgcgatccgcgccagcttcgccatcgat
ctggccaagggtgccaaggccactgccagcgcatcgcgtggccctgggttcgagccgtcg
cgcgtactcgaccgccagccggacagctactggtccacgccggacgatgtcaccacgccg
acgctgacgctggaactgccgacggcgcacagcttcgatctgattcgattgcgcgaatat
ctgccgctgggcgtgcgcgtcacccgcttcgcggtcgaagccgaggtcgatgggcaatgg
cggcgattggccgaagcgcaatgcatcggcgcgcagcgtatcgtgcggctggatcgcccg
attgccgcacgccgggtgcgcctggtggtgcttgaggcgccggtctgcccggcgatcacc
gagttcgcgctgttccgcgccgttgcgccggtgctggtcgcgcggccgacggcgaatgcg
ccggacgtgctgtccaccgccggctggcgcatcgtcgaggcgagcgcgccaggggcggaa
acgttgctcgacgacgatgccagcacgctctggatcacgccggcaccgacgccgggccat
cccgtgcaggcgaccatcgacctcggtgcgctgcgcaaggtggccgggttcagccttacg
ccctcgcgcgcggtgatgaccggtgcggcaccgccgaagggctatcgcgccgagaccagc
gaagatggtcagcactggcaaccggccggtgccggcgagctgtccaacatcgcctatgcg
ctctcgacccagcggctgaatttccccgaggtccgccagatccgctatctgcggctgtcg
ttcgcggaaacggcggtgcccgccgagcggctggcgattgcgggtatcggtgcgttctcg
cgcctgcgatga
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