Xanthomonas oryzae pv. oryzae KACC 10331: XOO1841
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Entry
XOO1841 CDS
T00235
Name
(GenBank) transcriptional regulator
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xoo03000
]
XOO1841
Transcription factors [BR:
xoo03000
]
Prokaryotic type
Helix-turn-helix
XRE family
XOO1841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ScfRs
Peptidase_M78
HTH_31
HTH_3
HTH_19
HTH_25
HTH_37
HTH_24
Sigma70_r4
MarR
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AAW75095
UniProt:
Q5H1S6
LinkDB
All DBs
Position
complement(1940077..1941477)
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AA seq
466 aa
AA seq
DB search
MRILRMPQSHAQLRHQLGLRLQRLRQRHGLTQAELARRLELSPSYLNQIERNQRPLTLAI
QQRLKATLGDLDGLLDLDDPAALVEPLDQSLRSLGHTLLPAELRALTGNLPQVAQALLDL
HRAHQHLLERNAALELQIGVEHVAVPSLSPGEQVRDYFNRAHNYLPELDERAEALYAELG
LTPENLPLRLRQRLADRHGLLVQDAADLHRDKRSMDAQARVLWLAAHLRPGQQAFQMAAQ
LALLECAPLLDARIADAGFEDAERIALSRIGLSNYFAGALVMPYSAFLHSAQTSRYDIEW
LADRFDVGFEAVCHRLSTLQRRGAAGLPIFFMRVDRAGNVSKRHSATDFHFSHVGGACPL
WIVYEAFNQPDRILTQIARMPDGRRYFWLARQVSSGPPGYGRPRKTFALAMGCDLRHADQ
LVYARGWDLNAVDDAVPIGPGCLTCARSTCVQRAFPALPRLPTSAR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaatcttgcgaatgcctcagtcgcacgctcaactccgccaccagctcgggctgcgc
ctgcagcggctgcgccagcgccacggcctgacccaagccgagctggcgcgccgactcgaa
ctgtcgccgagctatctcaaccagatcgagcgcaatcagcgcccgctcacgctggccatc
cagcagcggctcaaagccacgctgggcgacctggacggcctgctggatctggacgacccg
gccgcattggtcgagccgctggaccaatcgctgcgcagcctgggccacacgctgctaccc
gccgaactgcgcgcactcaccggcaacctgccgcaggtggcgcaggcgctgctggacctg
caccgcgcgcatcagcatctgctcgaacgcaacgctgcgctggaattgcagatcggggtc
gagcacgtggcggtgccatcgctgtcgcccggcgaacaggtgcgcgactacttcaaccgc
gcgcacaactatctgcccgaactggacgagcgcgccgaagcgctctacgccgaacttgga
ttgaccccggaaaatctaccgctacggctgcgccaacgccttgccgatcgtcatggcctg
ctggtgcaggacgccgccgacctgcaccgcgacaagcgcagcatggatgcgcaagcgcgt
gtgctatggctggcggcacacttgcggccgggccagcaggcgttccagatggccgcacag
ctggcattgctggaatgcgcgccgctgctggacgcgcggattgccgacgccggtttcgaa
gacgccgagcgcatcgcgctgtcgcggattggcctgtcgaactatttcgccggcgcgctg
gtaatgccctacagcgcgttcctgcacagcgcgcagacctcacgctacgacatcgaatgg
ttggccgatcgcttcgatgtgggtttcgaagcggtgtgtcaccggctcagcaccttgcag
cggcgtggagcagccggcttgccgatctttttcatgcgggtggaccgcgccggcaacgtg
tccaagcgtcattcggcaaccgatttccatttctcgcatgtcggcggcgcctgcccgttg
tggatcgtgtacgaagcgttcaaccagcctgatcgcatcctcacccagatcgcgcgcatg
cccgatggccggcgctatttctggctggcccgccaggtcagcagcggccctcccggatat
ggccgcccgcgcaagacgtttgccctggcaatgggctgcgacctgcgtcacgccgatcaa
ctggtgtatgcgcgcggttgggatctcaacgcggtcgacgatgcggtaccgatcggtccg
ggctgcctgacgtgcgcgcgcagcacctgcgtgcagcgcgcgtttcctgcgctgccgcgc
ctgccgacgagcgcgcgctag
DBGET
integrated database retrieval system
