Xanthomonas oryzae pv. oryzae KACC 10331: XOO1848
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Entry
XOO1848 CDS
T00235
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00071
Fatty acid degradation
xoo00280
Valine, leucine and isoleucine degradation
xoo00310
Lysine degradation
xoo00362
Benzoate degradation
xoo00380
Tryptophan metabolism
xoo00410
beta-Alanine metabolism
xoo00640
Propanoate metabolism
xoo00650
Butanoate metabolism
xoo00907
Pinene, camphor and geraniol degradation
xoo00930
Caprolactam degradation
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01120
Microbial metabolism in diverse environments
xoo01200
Carbon metabolism
xoo01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
XOO1848 (fadB)
00650 Butanoate metabolism
XOO1848 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
XOO1848 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
XOO1848 (fadB)
00310 Lysine degradation
XOO1848 (fadB)
00380 Tryptophan metabolism
XOO1848 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
XOO1848 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
XOO1848 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
XOO1848 (fadB)
00930 Caprolactam degradation
XOO1848 (fadB)
Enzymes [BR:
xoo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
XOO1848 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
XOO1848 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
XOO1848 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
ApbA
Pyr_redox_2
AlaDh_PNT_C
MORN
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
AAW75102
UniProt:
Q5H1R9
LinkDB
All DBs
Position
complement(1948747..1950828)
Genome browser
AA seq
693 aa
AA seq
DB search
MLPGFDGLRFSHWQAELREDGVVVLSLDRQDAPVNAFSQEVLLELGALVERLALEPPKGV
VLRSGKANGFIAGADLKEFQQFDHKGTVNDAIHRGQQVFQKLAELPCPTVAAIHGFCMGG
GTEIALACRYRVASDDGSTRVGLPETKLGIFPGWGGSARLPRLIGAPAAMDLMLSGRTVS
AKAARAIGLVDKVAAPAVLVDAAAALALAGTTRPFQQRATAWATNTLLARKILAPQMRKQ
VARKARKEHYPAPYALITVWERAGGSGIQARLAAERKAVVKLASTPTARNLIRIFFLTER
LKALGGKDAAGAAATPIRHVHVIGAGVMGGDIAAWAAYKGFDVTLQDREQRFIETALTRG
GELFAKRVKDDAKRPAVAARLRGDLAGAGVTQADLVIEAIIENPQAKRDLYQLIEPQLKP
DALLTTNTSSIPLTELRGHIQRPAQFAGLHYFNPVAMMPLVEIVQHDGLDPANAARLAAF
CKALDKFPVPVAGTPGFLVNRVLFPYLLEAATAYAEGIPGPVLDKTAVKFGMPMGPIELI
DTVGLDVAAGVGAELAPFLHLPIPAALITVEAGKRGKKDGQGLYTWENGRAVKPEVASGH
TAPADLEDRLILPLLNEAVACLHDGVVADADLLDAGVIFGTGFAPFRGGPIQHIRSVGAD
ALLERLQALHARYGERFAPRPGWDSPVLREAVV
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcttccaggtttcgacgggctccgattcagccattggcaggccgagctgcgcgaggac
ggcgtggtcgtgctcagcctcgatcgccaggacgcaccggtcaacgcattttcccaggag
gtgctgctggagttgggcgcactggtcgagcgcctggcactggagccgcccaagggcgtg
gtgctgcgctcgggcaaagccaacggtttcatcgccggtgccgatctgaaagaatttcag
caattcgaccacaagggcacggtcaacgatgcgattcatcgcgggcagcaggtctttcag
aagctggccgaactgccctgcccgaccgttgcggcgattcatggcttctgcatgggcggc
ggcaccgaaatcgcgctggcatgccgctaccgcgtggcctccgacgatggcagtacgcgc
gtcgggttgccggaaaccaagctcggcatcttccccggctggggcggcagcgcccgcttg
ccgcgcctgatcggtgcgccggcggcgatggacctgatgctcagcggccgcaccgtgtcg
gccaaggctgcgcgcgcaatcggtctggtcgacaaggtcgccgcacctgcggtgctggtc
gatgcggctgcggcactggcgctcgcgggtacgacgcgtccgttccagcagcgcgccact
gcgtgggccaccaacaccttgctggcgcgcaaaatactggcgccgcagatgcgcaagcaa
gtggcccgcaaggcgcgcaaggagcattaccctgcgccatacgcgttgatcacggtgtgg
gagcgggctggcggcagcggcatccaggcccgcctggcggccgagcgcaaggcagtggtc
aagctcgccagcacgccgaccgcacgcaacctgatccgcatcttcttcctgaccgagcgt
ttgaaggcgctgggcggcaaggatgcagccggcgcggcagcgacgccgatccgccatgtg
cacgtcatcggcgctggcgtgatgggcggcgacatcgcggcgtgggcggcctacaagggc
ttcgacgtcacattgcaggaccgcgagcagcgttttatcgagacggcgctgacgcgcggc
ggcgaactgttcgccaagcgcgtcaaagacgacgccaagcggccggccgtggccgcgcgt
ctgcgcggtgacctggccggtgcgggtgtgacgcaggccgatctggtgatcgaggcgatc
atcgaaaacccgcaggccaagcgcgatctgtatcaattgatcgagccgcagctcaagccg
gatgcattgctgaccaccaatacatcttcgattccgctgaccgaactgcgtggccacatc
cagcgcccggcgcagttcgccggcctgcactatttcaacccggtggcgatgatgccgctg
gtggaaatcgtgcagcacgatggcctggatcccgccaacgcggcgcgcctggctgcattc
tgcaaggcactggacaagttcccggtgccggtggccggcacgccggggttcctggtcaac
cgggtgctgttcccgtacctgcttgaagcggccaccgcgtatgcggaaggcatacccggc
ccggtgctggacaagacggcggtgaaattcggcatgccgatggggccgatcgagttgatc
gacaccgtgggtctggacgtcgccgccggcgtgggcgcggagttggcgccgttcctgcac
ctaccgattccggcagcgctgatcacggtggaagccggcaagcgcggcaagaaggacggc
cagggcttgtacacgtgggagaatgggcgtgcggtcaaaccggaggttgccagtggccac
accgcaccggcagatctggaagacaggctgattctgccgctgctcaacgaagcggtggcg
tgtctgcacgacggcgtggtggccgacgcagacctgctcgatgccggcgtcatcttcggc
accggctttgcgcccttccgcggtggcccgatccagcacatccgcagcgtcggcgcagat
gcgctgctggaacgtttgcaggcgctgcacgcacgttatggcgaacgtttcgcaccgcgc
ccgggttgggactcgccggtgttgcgggaggcggtggtgtaa
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