Xanthomonas oryzae pv. oryzae KACC 10331: XOO2180
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Entry
XOO2180 CDS
T00235
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
XOO2180 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
xoo03011
]
XOO2180 (rpsA)
Ribosome [BR:
xoo03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
XOO2180 (rpsA)
Bacteria
XOO2180 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AAW75434
UniProt:
Q5H0T7
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All DBs
Position
2290796..2292481
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AA seq
561 aa
AA seq
DB search
MTESFAELFEASQANLAKLKPGSIVTGTVVEVRGDVVVINAGLKSEGIVPIEQFRNDAGE
IDVGVGDQVKVALDSIENGFGETVLSREKAKRAMVWDELEDALENNETITGRISGKVKGG
FTVDIKDVRAFLPGSLVDVRPVRDPAYLEGKELEFKLIKLDRKRNNVVVSRRAVVESEHS
EEREQLMDKLQEGAILKGVVKNLTDYGAFVDLGGIDGLLHITDMAWKRVRHPSEVVNVGD
ELDVRVLKFDRERNRVSLGLKQLGEDPWDNIARRYPANSRVFGKVSNVTDYGAFVEIEPG
VEGLVHVSEMDWTNKNVNPSKVVQVGDEVEVMVLDVDEERRRISLGMKQVAANPWETFAA
THKKNDKVSGQIKSITDFGIFIGLDGGIDGLVHLSDISWNTTGEDVVRNYKKGDTLEAVV
LAVDPERERISLGVKQLEQDPFGQYMASNPKGSKVEGVVREVDAKGATIDLADGIEGYVA
SRDIANERVDDATQHLKVGDKIEAKFVGMDRKGRTLQLSIKAKDDAEMRETLEDYQSASA
SGGMTQLGALLRAQLNSNKSE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcttttgcagaactgttcgaagccagtcaagccaatctggcgaagctgaag
ccgggctccatcgtcaccggtaccgtcgtggaagtgcgcggcgacgtggtggtgatcaac
gctggcctgaagtccgaaggcatcgtgccgatcgagcagttccgtaacgacgctggcgag
atcgatgtcggcgtcggcgaccaggtcaaggtcgccctcgattccatcgagaacggtttc
ggtgagaccgtgctgtcgcgcgagaaagccaagcgcgcaatggtgtgggacgagctggaa
gatgcgttggaaaataacgaaaccatcaccggccgcatcagcggcaaggtcaagggtggt
ttcaccgtggacatcaaggatgtccgcgcgttcctgcctggttcgctggtggatgtgcgc
ccggtgcgcgacccggcctacctggaaggcaaggaactcgagttcaagctgatcaagctg
gaccgcaagcgcaataacgtggtggtttcgcgtcgtgcagtggtcgaaagcgagcactcg
gaagagcgcgagcagctgatggacaagctgcaggaaggcgcgatcctgaagggtgtcgtc
aagaacctgaccgactacggcgcattcgtggacctgggcggtatcgacggcctgctgcac
atcaccgacatggcctggaagcgcgtgcgccatccgtccgaagtcgtcaacgtcggcgac
gagctggacgtgcgcgtgctgaagttcgatcgcgagcgtaaccgcgtcagcctcggcctg
aagcagctgggcgaagatccgtgggacaacatcgcccgtcgttacccggccaacagccgc
gtgttcggcaaggtttccaacgtcaccgattacggcgcattcgtcgagatcgagccgggc
gtcgaaggtctggtgcacgtctccgagatggattggaccaacaagaacgtcaacccgtcc
aaggttgtgcaggtgggtgacgaagtcgaagtgatggtgctggacgtcgatgaagagcgt
cgccgcatctcgctgggcatgaagcaggttgccgccaatccgtgggaaaccttcgctgcg
acccacaagaagaacgacaaggtgtccggtcagatcaagtcgatcaccgacttcggcatc
ttcatcggtctggacggcggcatcgacggtctggtgcacctgtccgacatcagctggaac
accaccggtgaagatgtcgtgcgcaactacaagaagggcgacacgctggaagccgtcgtg
ctggcagtggacccggaacgtgagcgcatcagcctgggcgtcaagcagctggagcaggac
ccgttcggtcagtacatggcgtccaacccgaagggttcgaaagtcgaaggcgtggtgcgt
gaggtggatgccaagggcgccacgatcgacctggccgatggcatcgaaggctacgtcgct
tcacgcgacatcgccaacgagcgcgtcgacgatgcgacccagcacctgaaggtcggcgac
aagatcgaagccaagttcgtgggcatggaccgcaagggccgtaccctgcagctgtcgatc
aaggccaaggacgatgccgaaatgcgcgaaacgctggaggactaccagtctgcttccgcg
tcaggcggcatgactcagctgggcgcgctgctgcgtgcacagttgaacagcaacaagtcc
gagtaa
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