Xanthomonas oryzae pv. oryzae KACC 10331: XOO2198
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Entry
XOO2198 CDS
T00235
Symbol
LysR
Name
(GenBank) Transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xoo03000
]
XOO2198 (LysR)
Transcription factors [BR:
xoo03000
]
Prokaryotic type
Helix-turn-helix
LysR family
XOO2198 (LysR)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_24
MarR
HTH_5
HTH_8
Motif
Other DBs
NCBI-ProteinID:
AAW75452
UniProt:
Q5H0R9
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All DBs
Position
2310910..2311857
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AA seq
315 aa
AA seq
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MGLKKNSLLLRICSLLSNDMAALNYNHLRYFWAVAHDGNLTRTAERLNLTQSALSVQIRK
LEERLGHALFERRGRQLHLTEAGQIVLDHADAIFATGEELLGTLRQTGAARQALRVGSLA
TLSRNFQMEFMRPLLGRTDIDLILRSGSAGELLRALEALNLDVVLLNRAPAGDALSPFVT
DRLAEYPVSLVGTPDRLGHAASFAERLRNHPIILPTVDSSVRIGFDALADRLGVRPQIVA
EVEDMAMMRLLAREDIGLAVLPPIVVKDEIAAGALMEGDQLPDIVETFHAVTMSRRFPNP
LVRLLLQPAALSGSL
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggggttgaagaaaaattcattgttgttgcgaatttgttcgttattatcgaatgatatg
gcggccttgaactacaaccacttgcgctacttttgggcggtcgcgcacgacggcaatctc
acccgcacggccgagcgcctcaatctcacccagtcggcgttgtcggtgcagattcgcaaa
ctggaagagcgccttggccatgcgctgttcgaacgccgcgggcggcaactgcatctgacc
gaagccgggcagatcgtgctggaccatgccgatgcgatctttgccaccggcgaggagctg
ctcggcacgctgcggcagacgggtgcggcgcggcaggcgctgcgtgtcggctcgctggcc
acgctgtcgcgtaacttccagatggagttcatgcgcccgctgctgggccgcaccgacatc
gatctgattctgcgttcgggcagcgcgggcgaactgctgcgggcgctggaggcgctcaac
ctcgatgtggtgctgctcaatcgggcaccggccggtgacgcgctgtcgccattcgtcacc
gaccggcttgccgagtacccggtcagcctggtggggacaccggatcggttgggtcatgcc
gccagcttcgccgagcggctgcgcaatcaccccatcatcttgcccacggtcgatagcagc
gtgcgcatcggcttcgacgccttggcagatcgcctgggcgtgcggccgcagatcgtggcg
gaagtcgaggacatggcgatgatgcgactgcttgcccgcgaagacatcggcctggccgtt
ctgccgccgatcgtggtcaaggacgagattgccgccggggcgctgatggaaggcgatcaa
ttgccggacatcgtggagacgttccatgcggtcaccatgtcgcggcgctttccgaatccg
ttggtgcggcttctgcttcagcccgcagctttgtctggaagcctgtag
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