Xanthomonas oryzae pv. oryzae KACC 10331: XOO2297
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Entry
XOO2297 CDS
T00235
Symbol
msbA
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
XOO2297 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xoo02000
]
XOO2297 (msbA)
Enzymes [BR:
xoo01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
XOO2297 (msbA)
Transporters [BR:
xoo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
XOO2297 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
nSTAND1
AAA_30
AAA_29
AAA_21
DUF3584
RsgA_GTPase
MMR_HSR1
AAA_23
AAA_15
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AAW75551
UniProt:
Q5H0H0
LinkDB
All DBs
Position
complement(2432657..2434426)
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AA seq
589 aa
AA seq
DB search
MTNSTDRPVSVSSWRTYRRLVAFAKPYRLLLVAALIAALIEAAGTTGFLALMKPITDETF
IYKNAEVSRWLPVQIILLFVVRGIAGYITDMAMGKSARSIARDLRIKVMAKYLRLPGSRF
DSEPVPSMLIRLGSDSDQVAQAAVDAIKVMIQQSLQVIGALALMLWHSWQVTLTILVLAP
VLAWVMDKVARRYRRISHSIQESGAHLLQAADQTLSSHQEVKIYGAQQTEMERYGALADR
NLRLAMKVESTRGISTATVQMIGAIGLSALLFVAGAQALAGRLTAGDFVVLMTSMLTIIP
GLKQLTNVQNMVQRGLASAERLFSVLDSPDEPDQGAVALTRAKGLIEFRDVTARYPGQVN
PALADVSFIAQPGTVTAIVGRSGSGKSSLIKLIPRFYDAEAGQILLDGQPVQAYALADLR
RQIALVGQQVMLFDGSIAENVAFGEMRSADASQLERAILGANAMEFVAQLPEGLQSHVGA
KGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQDALHKLMPDRTTLVIA
HRLSTIEHADQVLVMDQGRIVERGTHHELLAQGGLYSHLHGMQFRERQA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaactccaccgaccgcccggtgtcagtttcatcctggcgcacgtaccgtcgcctg
gtggcgttcgccaagccgtatcgtttgctgctggtcgcggcgctgatcgcggccttgatc
gaagcggccggcaccaccggttttctggcattgatgaagccgatcaccgacgaaaccttc
atctacaagaatgccgaagtcagtcgctggctgccggtgcagatcatcttgctgttcgtg
gtgcgtggtattgccggctacatcaccgatatggcgatgggtaaatccgcacgcagcatt
gcgcgcgatctgcgcatcaaggtcatggcgaaatatctgcgtctgcccggatcgcgcttc
gattcggagccagtgccgtcgatgctgatccgtttgggttctgattcggaccaggttgcg
caagccgcggtggatgcgatcaaggtgatgatccagcaatcgctgcaagtcatcggcgcg
ctggcgctgatgttgtggcatagctggcaggtgacgctgaccattctggtgctcgccccg
gtgctggcttgggtgatggacaaggtggcgcggcgctaccggcgtatcagccacagcatc
caggaaagcggcgcgcacttgctgcaggccgcagaccagaccttgtccagccatcaggag
gtcaagatctacggcgcgcagcagaccgagatggagcgctatggcgcgctcgccgatcgc
aatctgcgcctggcgatgaaggtcgaatccacgcgcggcatttccaccgcgacggtgcag
atgattggtgcgatcggcctgtcggcgttgctgttcgtggctggtgcgcaggcattggcc
gggcgcctgacggccggtgatttcgtcgtgctgatgacttcgatgctgacgatcattccg
ggcctcaagcagctcaccaatgtgcagaacatggtgcagcgtggcctggcatcggccgag
cgcttgttctcggtgctcgatagcccggacgagccggatcaaggcgccgtagcgctgacg
cgtgccaagggcttgatcgaattccgcgatgtcactgcgcgctacccaggtcaggtcaat
ccggcgttggccgatgtcagcttcatcgcgcagccgggcacggtgaccgcgatcgtcggc
cgctcgggcagcggcaaatccagcctgatcaagttgattccacgcttctacgacgccgag
gccgggcagattctgctcgacggacaaccggtgcaggcgtatgcattggcggatctgcgc
cggcagattgcgctcgtcggtcagcaggtcatgctgttcgacggcagcatcgccgaaaac
gtggcgttcggcgaaatgcgcagcgccgacgccagccagctggagcgtgcgattctgggt
gccaatgcgatggaatttgtcgcgcaactgcccgaaggcctgcagtcgcatgtcggtgcc
aagggggggcgtctgtccggcggccagcgccagcgtctggcgatcgcacgcgccatgctc
aaggacgcgccgatcctgatcctggacgaagcgactgcagcgctggacaacgaatccgag
cgcttggtgcaagacgccctgcacaagctgatgccggaccgcaccacgctggtgatcgcg
catcgcctgtccaccatcgaacatgccgatcaggtgctggtgatggaccagggccggatc
gtcgagcgtggcacgcatcacgaattgctggcgcagggcggcttgtattcgcacctgcac
ggcatgcagttccgcgaacgccaggcatga
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