Xanthomonas oryzae pv. oryzae KACC 10331: XOO2307
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Entry
XOO2307 CDS
T00235
Symbol
sdhB
Name
(GenBank) succinate dehydrogenase iron-sulfur protein
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00020
Citrate cycle (TCA cycle)
xoo00190
Oxidative phosphorylation
xoo00650
Butanoate metabolism
xoo00720
Other carbon fixation pathways
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01120
Microbial metabolism in diverse environments
xoo01200
Carbon metabolism
Module
xoo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xoo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xoo_M00149
Succinate dehydrogenase, prokaryotes
xoo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XOO2307 (sdhB)
00650 Butanoate metabolism
XOO2307 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
XOO2307 (sdhB)
00720 Other carbon fixation pathways
XOO2307 (sdhB)
Enzymes [BR:
xoo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
XOO2307 (sdhB)
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GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Motif
Other DBs
NCBI-ProteinID:
AAW75561
UniProt:
Q5H0G0
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All DBs
Position
complement(2443357..2444139)
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AA seq
260 aa
AA seq
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MAEFTLPKNSKIGKGKHYPAQGAKNTRTFKVYRWDPDVDANPRTDSYEIDLDKCGPMVLD
ALIKIKNEIDPTLAFRRSCREGICGSCAMNIDGTNTLACTKAIAACGKSEVPIYPLPHMS
VIKDLVPDLTHFYAQYASIKPWIRTQTPPPPDRERLQSPEDRRKLDGLYECILCACCSTS
CPSYWWNGERYLGPAILLQAYRWIIDSRDEDTGARLDDLEDPFKLYRCHTIMNCARTCPK
GLNPALAIAEIKKLMMARRA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttcaccctccccaagaattcaaagatcggcaagggcaagcattaccctgca
cagggcgccaagaacacgcgcaccttcaaggtctaccgctgggatccggatgtcgacgcc
aacccgcgtaccgacagctacgagatcgatctggataaatgcggtccgatggtgttggac
gcgctgatcaagatcaaaaacgagatcgacccgacgttggcgttccgtcgctcctgccgc
gagggcatttgcggctcgtgcgcaatgaacatcgacggcaccaatacgctggcctgcacc
aaggcgatcgctgcgtgcggcaagtccgaagtgccgatctatccgctgccgcacatgagc
gtgatcaaggacctggtgccggatctgacgcatttctatgcgcagtatgcgtcgatcaag
ccgtggatccgcacccagaccccgccgccgccggatcgcgagcgcctgcagtcgccggaa
gaccgccgcaagctcgatggcttgtacgagtgcatcctgtgcgcctgctgctcgaccagc
tgcccgagctactggtggaatggcgagcgttacctgggcccggcgatcctgctgcaggca
taccgctggatcatcgattcgcgcgatgaagacaccggtgcgcgtctggacgatctggaa
gaccctttcaagctgtatcgctgccacaccatcatgaactgcgcacggacctgcccgaag
ggcctgaatccggcgctggcgatcgccgaaatcaagaagttgatgatggcgcgtcgcgcc
tga
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