Xanthomonas oryzae pv. oryzae KACC 10331: XOO2308
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Entry
XOO2308 CDS
T00235
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00020
Citrate cycle (TCA cycle)
xoo00190
Oxidative phosphorylation
xoo00650
Butanoate metabolism
xoo00720
Other carbon fixation pathways
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01120
Microbial metabolism in diverse environments
xoo01200
Carbon metabolism
Module
xoo_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xoo_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
xoo_M00149
Succinate dehydrogenase, prokaryotes
xoo_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XOO2308 (sdhA)
00650 Butanoate metabolism
XOO2308 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
XOO2308 (sdhA)
00720 Other carbon fixation pathways
XOO2308 (sdhA)
Enzymes [BR:
xoo01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
XOO2308 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
AAW75562
UniProt:
I1SB40
LinkDB
All DBs
Position
complement(2444369..2446159)
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AA seq
596 aa
AA seq
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MSAYKITEHKYDMVVVGAGGAGLRATFGLAQKGLQTVCLTKVFPTRSHTVAAQGGISAAL
GNMGEDDWRYHFYDTIKGSDWLGDQDAIEYMCREAIPAIIELEHYGVPFSRTEDGKIYQR
PFGGMTTKYGEGPSAQRTCAAADRTGHAMLHTLYQQSLAHNARFMIEYFALDLIFDEEGV
CRGVLALDMAEGSLHLFRAHGVVLATGGYGRAYFSATSAHTCTGDGGGLVMRAGLPVQDM
EFVQFHPTGIYGAGCLITEGVRGEGGILRNSNGERFMERYAPHYKDLASRDVVSRSMTVE
IREGRGVGEHKDHILLDLTHLGPEVINEKLPGIAESAHIFAGVDVTKQPIPVLPTVHYNM
GGIPTNFYGEVVRKQGDDPDAVVPGLYAIGEAACVSVHGANRLGSNSLLDLVVFGRAVAN
RCAETVKPNQPHKTLPSYACDKALGLLDKLRHANGSTPTSVIRDNMQRTMQSDAAVFRTS
KTLKEGVDKMAEIFATFEDVKVSDRSLVWNSDLIETYELNNLLLNAVATINSAEQRKESR
GAHSHEDFPDRDDVNWQKHTLVTVDDKGKCEFDYRPVHMYTLSKDVDVVPPKPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcttacaagatcacagaacacaagtacgacatggtcgtggtgggcgccggcggc
gctggcctgcgtgccacgttcggcctggcccagaagggcctgcagacggtctgcctgacc
aaggtcttcccgacccgttcgcacaccgtggcagcgcagggcggcatttccgcagcgttg
ggcaacatgggcgaagacgactggcgttatcacttctacgacaccatcaagggctccgat
tggctgggcgaccaggacgcgatcgagtacatgtgccgcgaagcgattccggccatcatc
gaactcgaacactacggcgtgccgttctcgcgtaccgaagacggcaaaatctaccagcgc
ccgttcggcggcatgaccaccaagtacggcgagggcccgtccgcgcagcgcacttgcgcc
gcagccgaccggactggccacgcgatgctgcacacgctctaccagcagtcgctggcgcac
aacgcacgcttcatgatcgagtacttcgcactcgatctgatcttcgacgaagaaggtgtc
tgccgcggcgtactcgcactggatatggccgaaggctcgctgcatctgttccgcgcccac
ggcgtggtgctggcgaccggcggttacggccgcgcctacttcagcgcgacctccgcgcac
acctgtaccggtgatggcggtggtttggtgatgcgtgccggcctgccggtgcaggacatg
gagttcgtgcagttccatcctaccggtatctacggtgcgggctgtctgattaccgaaggc
gtgcgcggcgaaggcggcattctgcgcaacagcaacggcgagcgcttcatggagcgctac
gcaccgcattacaaggatctggcgtcgcgcgacgtggtgtcgcgctcgatgacggtcgaa
atccgcgaaggccgtggcgtgggcgagcacaaggatcacatcctgctcgacctgacgcac
ctcggcccggaagtcatcaacgaaaagctgcccggcattgccgaaagcgcgcacatcttt
gccggtgttgacgtgaccaagcagccgattccagtgctgccgaccgtgcactacaacatg
ggcggcattcccaccaacttctacggcgaagtcgtgcgcaagcagggcgacgatccggat
gcagtggtgccgggcctgtacgccattggcgaagcggcgtgcgtgtccgtgcacggtgca
aatcgtctgggttcgaattcgctgctggatctggtggtgttcggtcgtgcggtggccaac
cgctgcgccgagacggtcaagcccaatcagccgcacaagaccttgccgtcgtatgcctgc
gacaaggcgctgggcctgctggacaagttgcgtcacgccaacggctccacgccgacctcg
gtgatccgtgacaacatgcagcgcaccatgcagtccgacgctgccgtgttccgcaccagc
aagacgctgaaggagggcgtggacaagatggccgagatcttcgccaccttcgaagacgtc
aaggtgtcggaccgctcgctggtgtggaactcggacctgatcgagacctacgagttgaac
aaccttctgctcaacgcagtggcgacgatcaattcggccgaacagcgcaaggaaagccgc
ggcgcgcattcgcacgaagacttcccggaccgcgacgacgtcaactggcagaagcacacg
ctggtgaccgtcgacgacaagggcaagtgcgagttcgattaccgtcctgtgcatatgtat
acgctgagcaaggatgtggacgtggtcccgccgaagccgcgcgtttactga
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