Xanthomonas oryzae pv. oryzae KACC 10331: XOO2406
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Entry
XOO2406 CDS
T00235
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xoo03032
]
XOO2406 (gyrA)
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO2406 (gyrA)
Enzymes [BR:
xoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
XOO2406 (gyrA)
DNA replication proteins [BR:
xoo03032
]
Prokaryotic type
DNA Topoisomerases
XOO2406 (gyrA)
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XOO2406 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
L27_2
Motif
Other DBs
NCBI-ProteinID:
AAW75660
UniProt:
Q5H061
LinkDB
All DBs
Position
complement(2564622..2567318)
Genome browser
AA seq
898 aa
AA seq
DB search
MAETAKEIIQVNLEDEMRKSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELGAHSN
KAYFKSARIVGDVIGKYHPHGDQSVYDTLVRMAQPFSLRYMMVDGQGNFGSVDGDSAAAM
RYTESRMSRLAHELMADIDKETVDFQPNYDEKEQEPTVMPTRFPSLLVNGSAGIAVGMAT
NIPPHNLTEAINACIALIDTPELDVEGLMEYIPGPDFPTAGIINGTAGIAAGYRTGRGRV
RIRAKADVEVADNGREAIVVTEIPYQVNKARLIEKIAELVKEKKLEGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALIDGRPQLMNLKQMLEAFIRHRREV
VTRRTIFELRKARARAHVLEGLTVALANIDEMIELIKTSANPQEARERMLAKTWQPGLVG
ALLGAAGAEASKPEDLPPGVGLIKGFYQLSEVQASQILEMRLHRLTGLEQEKLTDEYKQL
LGVIEGLIRILENPDVLLQVIRDELINIREEYGDERRTEIRHSEEDLDILDLIAPEDVVV
TLSHAGYAKRQPVSAYRAQRRGGRGRSAAATKEEDFIDQLWLVNTHDTLLTFTSSGKVFW
LPVHQLPEAGSNARGRPIINWIPLEAGERVQAVLPVREYVDNRYVFFATRNGTVKKTSLS
EFAFRLARGKIAINLDEGDALIGVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGV
RGIRLTKGEEVVSLIVAERAGGADEEIEADDVDDVVETTDGAETAVIEVADDGNVAYILT
ATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGATDEVLLISDGGTLVR
TRGSEISRVGRNTQGVTLIRLSKGEKLQAVERLDASLDEVEDVAGEAAVASDTPPADA
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaccgccaaggaaatcatccaggtcaacctggaagacgagatgcgcaagagt
tatctcgattacgcgatgagcgtgatcgtgggccgcgcactccccgatgcccgtgatggc
ctcaagcccgtgcaccgacgcgtgttattcgcgatgcacgagctgggcgcacacagcaac
aaggcctacttcaagtcggcgcgtatcgtcggcgacgtcatcggtaaataccacccgcac
ggcgaccagtcggtatacgacacgctggtgcgcatggcgcagccgttttcgctgcgttac
atgatggtggacggccagggtaacttcggttcggtcgacggcgactccgccgcggcgatg
cgttataccgagtcgcgcatgtcgcggctggcgcatgagctgatggccgacatcgacaag
gaaaccgtcgatttccagcctaattacgacgaaaaggaacaggaaccgacggtcatgccg
acccggttcccgagcctgctggtcaacggctcggccggtatcgcggtgggcatggccacc
aatatcccgccgcataacctgaccgaggcgatcaacgcctgcatcgcgctgatcgacacc
ccggagctggatgtcgaaggcctgatggaatacatcccgggcccggatttccccaccgcc
ggcatcatcaacggcaccgccggcattgccgccggctatcgcaccggccgtggccgcgtg
cgcatccgtgccaaggccgatgtggaagtggccgacaacggccgcgaggcgatcgtcgtc
accgagatcccgtaccaggtcaacaaggcgcggctgatcgaaaagattgccgagctggtc
aaggaaaagaagcttgaaggcatcagcgagctgcgcgatgagtccgacaaggacggcatg
cgcatctacatcgaaatcaagcgcggcgaatcggccgaggttgtgctcaacaacctgtat
cagcagacccagatggaatcggtgttcggcatcaacatggtggcgctgatcgacggccgc
ccgcagttgatgaacctcaagcagatgctggaggcgttcattcgccaccgccgcgaggtg
gtcacccgccgcaccattttcgaactgcgcaaggcgcgtgcgcgtgcgcacgtgttggaa
ggcctgaccgttgcgttggccaacatcgatgaaatgatcgagttgatcaagacctcggcc
aacccgcaggaagcgcgcgagcgcatgctggccaagacctggcaaccgggtctggtcggt
gcgctgctgggcgcagccggtgccgaagcgtccaagccggaagatctgccgccgggcgtt
ggcctgatcaagggtttctatcagctcagcgaagtgcaggcctcgcagattctggaaatg
cgtctgcatcgtctgactggcctggaacaggaaaagctgaccgacgagtacaagcaactg
ctcggggtcatcgaaggcctgatccgcatcctggaaaatccggatgtgctgctgcaggtg
atccgcgacgagctgatcaatatccgcgaggaatacggcgacgaacgccgcaccgagatc
cgtcacagcgaagaagacctggatatcctggatctgattgcgccggaagacgtggtggtg
acgctctcgcacgccggttatgccaagcggcagccggtaagcgcgtatcgcgcgcagcgg
cgtggtggccgtggccgttctgccgcggcgaccaaggaagaagatttcatcgaccagctg
tggttggtcaacacgcacgacacgctgctgaccttcaccagcagcggcaaggtgttctgg
ctgccggtgcatcaattgccggaggccggctccaatgcgcgtggccgcccgatcatcaac
tggattccgctggaagccggcgagcgcgtgcaggcggtgctgccggtgcgcgaatatgtt
gacaatcgttatgtgttcttcgctacccgcaacggtacggtcaagaagacctcgctgagc
gaattcgccttccgtctggcgcgcggcaagatcgcgatcaatctggatgaaggcgatgca
ctgatcggtgtggcattgaccgacggcgaccgcgacgtgttgctgttcgcctccaacggc
aagaccgtgcgctttggcgaatccaccgtgcgttcgatgggccgcaccgccaccggcgtg
cgcggtatccgtctgaccaagggcgaagaggtggtgagcctgatcgtggctgagcgtgcc
ggcggcgccgatgaagagatcgaagccgacgatgtcgatgatgtggtcgaaaccaccgat
ggcgctgaaactgcggtcatcgaggttgctgatgacggcaacgtggcctacatcctgacc
gccaccgagaacggctacggcaagcgcactccgctggccgaatatccgcgcaaggggcgc
ggcacgcagggcgtgatcggcatccagaccaccgagcgcaacggcaagttggtgcgtgca
gtgctgctgggggccaccgacgaagtgctgctgatttccgatggcggcacgctggtgcgt
acacgtggttcggagatctcgcgcgtgggccgtaacacgcagggcgtcacgctgatccgc
ttgtccaagggcgaaaagttgcaggcagtggaacgcctggatgcatcgctggacgaggtg
gaagatgtagcaggcgaggcggctgttgccagcgatacgccgcctgcagacgcctga
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