Xanthomonas oryzae pv. oryzae KACC 10331: XOO2561
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Entry
XOO2561 CDS
T00235
Name
(GenBank) Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_4
PAS
PAS_9
PAS_PdeA
3HCDH_RFF
Motif
Other DBs
NCBI-ProteinID:
AAW75815
UniProt:
Q5GZQ6
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All DBs
Position
complement(2710191..2712977)
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AA seq
928 aa
AA seq
DB search
MDSGVIASMLQHPLTSAVVLLDAHGQPLAANRVAQSLGLPATLGAYAEVLESSRAQLADN
GGMAPCVLPGTGGGRLEGWLRAVCDEHGQVMAFTLSIPEPKGADGTSRWEMGLDSADHGL
WDWDIPADVVYRSERWTRMLGYSEQPPPNNLTALSGLMHPEDHAHVSAAVQAHLEGRTDT
YVAEFRLRQHDGQWRWILDRGRVVSRTADGRPLRMVGTHTDVHHHKLLEQQLREQQAQLE
EAQRIASMGSWSWDSHQDALWVSQDFLQQLGMIHLRLQGIRGILRLLCRPSVAQLRSAWR
KIKHEGMPVHFELEINGLPGANPHHLRVWAQPVFDGDGSMVRVLGQLQNVTEQRQTDALI
RWRTELLNRVSALGKIGGCEIEVDTRRMQWTEECYRIHGLRKENITLEQALSLYTQDSRD
AFEAALLRISDGGLPEQLELCFYRNSGQLIWVQVLIELDRREGLPPRFVALFRDVTRERE
ANERIELLAHYDRLTGLPNRFLLREQAENAIREAHERGQVLAMLLIDLDGFKSVNDSFGY
ATGDNLLKLASSRLHQHLRNSDLFGRFSDDEFIVLLRDMSEPEDAGHVARKLIAALGEPL
RKEHVTLKLGASIGIALQGEGLSDFDSLLRAADAAMHAAKETGRNTFHYYSQDVLLRAQR
RLELGHALQGALEREEFTLVYQPLVNTSGDASPAIEALMRWNRPGHGPCSPVEFIPIAEE
CGEIVRLGEWVIGEACRQAVVWDRAGLHFSRVSVNVSAVQLRERGFAERVLEICRDNGWP
PSRLELELTESALIRDSDSLRRCFELFEQNGVLLAVDDFGTGFSNLHYLNRFPVQRLKID
RSFVQGMLDDANTAEVTQAIVHLGHALGMQVVAEGVETVQEDALLRQQGCDEIQGYFYSR
PLSPRDMAQWLREAETGMRLGARLVIAS
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtggactcaggcgtcattgcaagcatgctgcagcacccgctgacctcggcggtggtgttg
ttggatgcgcatggccagcccctggcggccaaccgcgttgcgcaatccctcggattgccg
gcaaccctgggtgcgtatgccgaagtattggaaagtagccgcgcccagctggccgacaac
ggtggcatggcgccctgcgtattgccggggaccggcggcggtcggctggaaggctggctg
cgtgcggtctgcgacgaacatggtcaggtcatggcgttcaccttgagcattcccgagccg
aagggtgccgatggcaccagtcgctgggaaatgggcttggacagcgccgatcacggcttg
tgggactgggatattccggccgatgtggtgtatcgctccgagcgctggacgcgcatgctt
ggttattccgagcagccgccgccgaacaatctcaccgctttgtccgggctgatgcatccg
gaagaccatgcgcatgtcagcgcggcggtgcaggcgcatctggaagggcgcaccgacacc
tacgtggccgaattccggctgcgccagcacgacggccagtggcgctggatcctggatcgc
ggccgcgtggtatcgcgcaccgccgacggacgcccgctgcgcatggtcggcacgcacacc
gacgtgcaccatcataaattgcttgagcagcagctgcgcgagcagcaggcccagctcgaa
gaagcccaacgcattgccagtatgggcagctggagctgggattcgcatcaagatgcgctg
tgggtgtcgcaggatttcctgcaacaactcggcatgatccacctgcgtttgcaaggtatt
cgcggcatcctgcgtttgctctgtcgcccctcggttgcgcagctgcgcagcgcctggcgc
aagatcaagcacgaaggcatgccggtgcatttcgaactggaaatcaacggtctgcccggc
gctaatccgcatcatctgcgggtctgggcgcagccggtgttcgacggcgacggcagcatg
gtgcgcgtccttggccagctgcagaacgtcaccgagcaacgccagaccgacgccttgatc
cgctggcgcaccgaactgctcaatcgcgtgtctgcgcttggcaagatcggcggctgcgag
atcgaggtcgacacccggcgcatgcagtggaccgaggagtgctaccgcatccatggcctg
cgcaaggaaaacatcaccctggagcaggcgctgtcgctgtacacccaggattcgcgcgac
gccttcgaagcggcgctgctgcgcatttccgacggcggcctgcccgagcagctggagctg
tgtttctatcgcaactccggccagctcatctgggtgcaggtgctgatcgagctggaccgt
cgcgagggcttgccgccgcggtttgtggcgttgttccgcgatgttacccgcgaacgcgaa
gccaacgaacggatcgagctgctcgcgcattacgaccgcctgaccggcttgccgaaccgc
ttcttgctgcgcgaacaggcagaaaacgccattcgcgaggcgcacgagcgcggccaggta
ttggcgatgctgctgattgatctggatggcttcaaaagcgtcaacgattcgtttggctac
gccaccggcgacaacctgctcaagctcgcctcgtcgcgcctgcatcaacatttgcgcaat
agcgacctgttcggccgcttcagcgacgacgaattcatcgtgctgttgcgcgatatgtcc
gagccggaagacgccggccatgtggcgcgcaagctgattgctgcgctcggtgagccgctg
cgcaaggaacacgtcaccctcaagctcggcgccagcatcggcatcgcgctgcagggtgaa
ggcctgtcggatttcgacagcctgctgcgcgccgccgatgcggcgatgcacgcagccaag
gagaccggccgcaacaccttccattactacagccaggacgtgttgctgcgtgcgcagcgt
cgcctggaactggggcacgcgctgcagggtgcgctcgagcgcgaagaattcacgctggtc
taccagccgctggtcaacacctcaggcgacgcgtcgccggcgatcgaagcgttgatgcgc
tggaatcgccccggacatggtccgtgcagcccggtcgaattcattccgatcgccgaggaa
tgcggagaaatcgtgcgcctgggcgaatgggtgatcggcgaggcctgccgccaggcggta
gtctgggatcgcgccggcctgcatttcagccgcgtctcggtgaatgtgtctgcggtgcaa
ttgcgcgagcgtggttttgccgagcgcgtgctggaaatctgccgcgataacggatggccg
ccttcacgcctcgaactcgaactgaccgaatctgccttgattcgcgactccgattcgctg
cgccgctgcttcgaactgttcgaacagaacggcgtgttgctggcggtggacgacttcggc
accggcttctccaatctgcattacctcaaccgcttcccggtgcagcgtctgaagatcgac
cgcagcttcgtgcaaggcatgctcgacgatgccaacacggccgaagtcacccaggccatc
gtgcatctgggccatgccctgggcatgcaggtggtcgccgaaggcgtggaaaccgtgcag
gaagatgcactgctgcgtcagcagggttgcgacgaaatccagggttatttctattcacgc
ccgctgtcgccgcgcgacatggcgcagtggctgcgcgaggccgaaaccggcatgcggctg
ggggcacggctggtgattgccagctga
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