Xanthomonas oryzae pv. oryzae KACC 10331: XOO2716
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Entry
XOO2716 CDS
T00235
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xoo03009
]
XOO2716 (dbpA)
Enzymes [BR:
xoo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
XOO2716 (dbpA)
Ribosome biogenesis [BR:
xoo03009
]
Prokaryotic type
rRNA helicases
XOO2716 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
AAW75970
UniProt:
Q5GZA1
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All DBs
Position
2876181..2877629
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AA seq
482 aa
AA seq
DB search
MGIGKSTGCCSDESRIPNPGLKCAMNEFSALPLSPALAPGIDALGYTVLTPVQAQSLPPI
LRGLDVIAQAPTGSGKTAAFGLGLLQKLDPALTRAQALVLCPTRELADQVGKQLRKLATG
IPNMKLVVLTGGMPLGPQLASLEAHDPHVVVGTPGRIQELARKRALHLGGVRTLVLDEAD
RMLDMGFEEPIREIASRCDKHRQSLLFSATFPDIIRTLAREILKDPIEITVEGADNAPEI
DQQFFEVDPTYRQKAVAGLLLRFTPESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDME
QRDRDEVLVRFVNRSCNVLVASDVAARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAG
KHGLALSLVAPRETARAQALEAEQGQPLKWSRAPLATARPAQLPQAAMTTLRIDGGKTDK
LRAGDILGALTGEAGLSGAAIGKIAIYPTRSYVAIARAQVAKALAHLHAGKIKGRRFRVS
KL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttggggattggcaagagcacaggctgttgcagtgacgaatcccgaattccgaatcccggg
ctaaaatgcgccatgaacgaattctccgcgctgccgctgtcgccggccctggcccccggc
atcgacgccctgggctacaccgtcctgactcccgtccaggcgcagagcctgccgccgatc
ctgcgggggctcgatgtcatcgcgcaggcgccgaccggcagcggcaagactgccgcgttc
gggcttggcctgctgcaaaagctcgaccccgcactgacccgcgcgcaagcgctggtgctc
tgccccacccgcgagctggccgatcaggtcggcaagcaactgcgcaaactcgccactggc
atccccaacatgaaattggtggtactcaccggcggcatgccgctgggcccacagctggcc
tcgctggaagcgcacgacccgcacgtggtggtcggtacgcccgggcgcatccaggagctg
gcgcgcaaacgcgccctgcatctgggcggcgtgcgcaccctggtgctggacgaggccgac
cgcatgctcgacatgggcttcgaagaacccatccgcgagattgccagccgctgcgacaaa
caccgccagagcctgctgttttcggccacgttccccgacatcatccgcaccctggcgcgc
gagatcctgaaagacccgattgaaatcaccgtcgaaggcgccgacaacgcgccggaaatc
gatcagcagttcttcgaggtcgatcccacctatcggcagaaagcggtagccggcttgctg
ctgcgcttcacccccgaatccagcgtggtgttctgcaatacccgcaaggaagtggatgaa
gtggccggctcgctgcaggagttcggcttctccgcgctagccctgcacggcgacatggag
cagcgcgaccgcgatgaggtgctggtgcgtttcgtcaaccgcagctgcaacgtgttggtg
gccagcgacgtggcagcacgcggattggacgtggaagacctctcggccgtggtcaattac
gagctgcccaccgataccgaaacctaccgccatcgcatcggccgcaccgcgcgtgcaggc
aagcacgggctggcattaagcctggtcgccccgcgtgaaaccgcgcgcgcccaagcgctg
gaagccgaacaaggccagcccttgaagtggtcgcgtgcaccactggccaccgcacgcccc
gcgcagctgccgcaggcggcaatgaccaccttgcgcatcgacggcggcaagaccgacaag
ctgcgtgccggcgacatcctcggtgcattgaccggcgaagccggactctcgggcgcggcg
atcggcaagatcgccatctaccccacccgctcctacgtcgccatcgcgcgcgcgcaggtc
gccaaggcgctggcacatctgcacgccggcaagatcaaggggcgccggttccgggtcagc
aagctctga
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