Xanthomonas oryzae pv. oryzae KACC 10331: XOO2868
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Entry
XOO2868 CDS
T00235
Symbol
rpfB
Name
(GenBank) RpfB protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00061
Fatty acid biosynthesis
xoo00071
Fatty acid degradation
xoo01100
Metabolic pathways
xoo01212
Fatty acid metabolism
xoo02024
Quorum sensing
xoo04146
Peroxisome
Module
xoo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XOO2868 (rpfB)
00071 Fatty acid degradation
XOO2868 (rpfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XOO2868 (rpfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
XOO2868 (rpfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xoo01004
]
XOO2868 (rpfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xoo04147
]
XOO2868 (rpfB)
Enzymes [BR:
xoo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XOO2868 (rpfB)
Lipid biosynthesis proteins [BR:
xoo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XOO2868 (rpfB)
Exosome [BR:
xoo04147
]
Exosomal proteins
Exosomal proteins of breast milk
XOO2868 (rpfB)
Exosomal proteins of breast cancer cells
XOO2868 (rpfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AAW76122
UniProt:
Q5GYU9
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All DBs
Position
3077677..3079272
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AA seq
531 aa
AA seq
DB search
MFATSVKRFADRPAYHSFGKTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQY
PIATFGVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQV
ITTGLGDMLGFPKAAVVNFVVNYVKKLVPDYRINGAIRFREALAQGRKHSMPTLQIEPDD
IAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWVGGTGQLLEGQEVVITALPLYHIFAL
TANGLVFMKVGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPGFDQIDFS
SLKMTLGGGMAVQRSVAERWKKVTGLTLVEAYGLTETSPAACINPMTLKDYNGSIGLPIP
STDACIKDDAGTALAIGEIGELCIKGPQVMKGYWKKADETAKVMDAEGWLHTGDIARMDE
QGFVYIVDRKKDMILVSGFNVYPNEIEDVIATMPGVLEVAAVGMPDEKSGEIVKAVIVKK
DPALTADDVKAHCRANLTGYKQPRVIEFRKELPKTNVGKILRRELRDAPKT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgccacgtcggtaaaacgctttgccgacaggcctgcgtatcacagcttcggcaag
accatcacctaccgcgaagcggatcagctggtcgagcaattcgctgcttacctgcttggc
gaactgcagttgaagaagggcgaccgcgtcgccttgatgatgcccaattgcctgcagtat
ccaatcgcaaccttcggcgtcctgcgtgccggcctgaccgtggtcaacgtcaatccgctg
tataccccgcgcgaactcaagcatcagttgatcgactccggcgcaagcgtgctggtggtc
atcgacaatttcggtaccaccgtgcagcaggtcattgccgacacgcccgtcaagcaagtc
atcaccaccggtctgggcgacatgctgggctttccgaaggcggcggtggtcaacttcgtc
gtcaattacgtcaagaagttggtgccggactaccgcatcaacggtgcgatccgcttccgc
gaggcgctggcgcagggccgcaagcacagcatgccgacgctgcagatcgagcccgacgac
atcgcgttcctgcagtacaccggcggcaccaccggcgtggccaagggcgcgatgctgact
caccgcaatctggtcgccaatatgcagcaggcgcaccagtgggtcggtggcaccggccag
ctgttggaaggccaggaagtggtcatcactgcgctgccgctgtaccacatcttcgcattg
acggccaatggcctggtcttcatgaaggttggcggctgcaatcacctgatcagcaacccg
cgcgacatgcccggcttcgtcaaggagctgaaaaagacccgcttcaccgcgttcactggc
gtcaacacgctgttcaacggcctgctcaatacacccggtttcgatcagatcgatttttcc
tcactcaagatgaccctgggcggcggcatggccgtgcagcgctcggtcgccgaacgctgg
aagaaggtcaccggcctgaccctggtcgaggcgtacggcctgaccgaaacctcaccggcc
gcctgcatcaacccgatgaccctaaaggactacaacggctcgatcggcctgccgattccg
tccaccgatgcctgcatcaaggacgacgccggcacggcgttggcgatcggcgagatcggc
gagttgtgcatcaagggcccgcaggtgatgaagggctattggaagaaggccgacgagacc
gccaaggtgatggatgccgaaggctggctgcacactggcgacatcgcccgcatggacgag
caaggcttcgtctacatcgtcgatcgcaaaaaggacatgattctggtgtccggcttcaac
gtctatccgaacgagatcgaagacgtgatcgccaccatgcccggcgtgctggaagtggca
gcggtcggcatgccggacgaaaagtccggcgagatcgtcaaggcggtcatcgtgaagaag
gaccctgccctgaccgccgacgatgtgaaggcgcattgccgcgccaacctcaccggctac
aagcagccgcgcgtgatcgaatttcggaaggaattgcccaagaccaatgtgggcaagatc
ctgcgccgtgaattgcgggacgcgccgaaaacgtaa
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