Xanthomonas oryzae pv. oryzae KACC 10331: XOO2939
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Entry
XOO2939 CDS
T00235
Symbol
alaS
Name
(GenBank) alanyl-tRNA synthetase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
XOO2939 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
xoo01007
]
XOO2939 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xoo03016
]
XOO2939 (alaS)
Enzymes [BR:
xoo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
XOO2939 (alaS)
Amino acid related enzymes [BR:
xoo01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
XOO2939 (alaS)
Transfer RNA biogenesis [BR:
xoo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
XOO2939 (alaS)
Prokaryotic type
XOO2939 (alaS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
CpgS_C
Snapin_Pallidin
Motif
Other DBs
NCBI-ProteinID:
AAW76193
UniProt:
Q5GYM8
LinkDB
All DBs
Position
complement(3146703..3149351)
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AA seq
882 aa
AA seq
DB search
MNAPAKFSTSQIRSDFLAFFEGRGHTIVPSAPLVPGNDPTLLFTNSGMVQFKDVFLGAEK
RSYVRAADVQRCLRAGGKHNDLDSVGYTARHHTFFEMLGNWSFGDYFKKDAIAWAWELLT
QIWKLPTDRLLVTVYHTDEEAFALWRDMIGIPESRIVRIGDNKGAPYASDNFWQMADTGP
CGPCTEIFFDHGDHIAGGPPGSPDEDGDRFIEIWNLVFMQFDRQPDGTLVPLPAPCVDTG
MGLERLAAILQHVHTNYEIDLFQALIGKASALTGITDLENKSLRVIADHIRACSFLIVDG
VLPSNEGRGYVLRRIIRRALRHGWMLGVRQPFFSKMVPTLVELMGEAYPELVVAKDTVAR
ALLAEEERFAETLDAGMKIFDEVASRSQDIIPGADAFRLYDTYGFPVDLTADIARERGMR
VDMEGFECAMERQRETARAAGKFGGGVALPADLVASMSPTVFLGYEAYDADALRVVALLK
QGRPVERAQAGDEVIVFTDRTPFYAESGGQVGDSGQLNGPGVLIEVADTQKFAGQFHGHV
GRISEGTLALGDVLAGGIDVQRRGKTILNHSATHLLHAALREVLGTHVQQKGSLVAPDRL
RFDFSHFQPITADELAVIERKVNAEVRTNHGVEVHNMAMQEALDFGAMALFGEKYGENVR
VLKMGGYSTELCGGTHVTRTGDIGLFKITSEGGVSSGVRRIEAVTGQGALDYVADEERRL
LEAAHLLGGNATEVVDKVRALTERQKRLQRELESLKAKLASGATADLGAAAIDVAGVKVV
AVRLEGFDAKALRDAMDRLKQQLGDSVIVLAGASGGKVALVSGVNGSPTGKVKAGELLSN
IASQIGGKGGGRPDLAQGGGEDGPALATALDGVPLWVKQHLG
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcacctgccaaattcagcacttcccagatccgtagcgacttcctcgcgttcttc
gaggggaggggccacaccatcgtgccatccgcgccgctggtgccgggtaacgaccccacc
ttgctgtttaccaactccggcatggtccagttcaaggacgtcttccttggcgcggagaaa
cgcagttacgtgcgtgccgctgacgtgcagcgctgcctgcgtgccggtggcaagcacaac
gatctggactcggtcggctacaccgcgcgtcaccacaccttcttcgaaatgctaggcaac
tggtcgttcggcgactatttcaagaaggacgccatcgcctgggcatgggaactgctgacc
cagatctggaagctgccgacagaccgtctgttggtcaccgtctaccacaccgacgaagaa
gcttttgcgttgtggcgcgacatgatcggcatcccggaaagccgcatcgtgcgcatcggc
gacaacaagggtgcgccctacgcgtcggataatttctggcaaatggccgacaccggcccg
tgcggcccgtgtaccgaaattttcttcgaccacggcgatcacatcgctggtggtccgccg
gggtcgccggatgaggatggcgaccgctttatcgagatctggaacctggtcttcatgcag
ttcgatcgccagcccgacggcacactggtacctctgccagcgccatgcgtggacactggc
atgggattggagcgtcttgccgcgatcctgcagcatgtccatacgaactatgaaatcgac
ctgttccaggcgttgatcggcaaggccagcgcgctgaccggcatcaccgatctggagaac
aaatcgctgcgggtgatcgccgatcacatccgcgcttgttcgtttctcatcgtcgatggt
gtgctgccctccaacgaaggccgcggctatgtgctgcgtcggattatccgacgtgcgctg
cgccatggttggatgttgggcgtgcgccagccgttcttcagcaagatggtgcccacgctg
gtcgaactgatgggcgaagcctaccccgagctggtggtggcgaaggacaccgtggcgcgc
gccttgttggccgaagaagagcgttttgcggagacgctggacgccggcatgaaaatcttc
gacgaggtcgcgtcgcgctcgcaggacattatcccgggcgccgatgcgttccggttgtac
gacacctatggcttcccggtcgacctgaccgccgatatcgcacgcgagcgcggcatgcgc
gtggacatggagggcttcgagtgcgccatggagcgccagcgcgagactgcgcgtgcggcc
ggcaagttcggcggcggcgtggcattgcccgccgatctggtcgccagcatgtcgccaacg
gtgttcctgggttacgaagcgtacgatgccgatgcgctcagggtcgtggcgttgctcaag
cagggccgcccggtcgaacgtgcgcaggccggcgacgaggtgatcgtgttcaccgaccgc
acgccgttctacgccgagtcgggtggtcaggttggcgatagcggtcagctgaacggcccc
ggtgtgttgatcgaagttgccgacacgcagaagttcgccggtcagttccatggccatgtg
ggtcgcatcagcgaaggcacgctcgcgcttggcgatgtgcttgccggtgggatcgacgta
caacgtcgcggcaagaccatcctcaaccattcggcgacccatctgctgcatgccgcgttg
cgcgaagtgttgggaacgcatgttcagcagaagggctcgctggtcgcaccggatcgtctg
cgcttcgacttctcgcacttccagccgatcactgcggatgagcttgctgtgatcgagcgc
aaggtcaacgccgaagtgcgcaccaaccatggcgtggaagtgcataacatggccatgcag
gaggcgctggatttcggcgcgatggcgttgttcggcgagaaatacggcgaaaacgtccgc
gtgctcaagatgggcggttattccaccgaactgtgtggtggcacgcatgtcacccgtacc
ggcgacatcggcctgttcaagatcacctccgaaggcggcgtgtcctcgggagtgcgtcgt
atcgaagcggtgaccgggcagggcgcgctggattatgtggccgacgaagagcgtcgcttg
cttgaggctgcccatttgctcggcggcaacgcgaccgaggtggtggacaaagtgcgcgca
ctgaccgagcgtcagaagcggctgcagcgcgagctggaatcgctcaaggccaagctggcg
tcgggtgcaacggctgacctgggcgctgctgcgatcgacgtcgccggggtcaaggtggtg
gcagtgcgtctggaaggcttcgatgccaaggcgctgcgcgatgcgatggatcgcctgaag
caacagctcggcgactctgtgatcgtgctggctggcgcttcaggcggcaaagttgcgctt
gtctctggtgtgaacggcagcccaactggcaaggtgaaggcaggggaacttctcagcaat
atcgccagtcagatcggcggcaagggcggtggccgtccagatctcgcccagggtggtggc
gaggacgggcccgcccttgcgaccgcactcgacggtgtgcccctctgggtcaagcaacac
ttgggctga
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