Xanthomonas oryzae pv. oryzae KACC 10331: XOO3020
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Entry
XOO3020 CDS
T00235
Name
(GenBank) unknown protein
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Module
xoo_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xoo03000
]
XOO3020
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
xoo01504
]
XOO3020
Transcription factors [BR:
xoo03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
XOO3020
Antimicrobial resistance genes [BR:
xoo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
XOO3020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
TetR_N
HTH_6
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AAW76274
UniProt:
Q5GYE7
LinkDB
All DBs
Position
3240975..3241553
Genome browser
AA seq
192 aa
AA seq
DB search
MRQDDQRLIRLLAATLTRRPRSNLTELAAGAGISRATLYRFAPTRAAIVEKVTAEAWVRL
QAALPGGDASPDPMARLRRTTHALVEDLDLVIYIVNEMGMEGAERGNTYYAAPEWESFQA
HLDAFFLHGQQRGVFGIEMPASWWSDFYLSCLFGAGWAVATGRLAQASVVRAVLTSFLEG
ARSGSRMQPSLP
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaggacgaccaacgccttatccgcctgctggccgccacgctgacccgccgcccg
cgcagcaacctcaccgagctggccgctggcgcggggatcagccgcgcgacgctataccgg
tttgcaccgacgcgggcggccatcgtcgagaaggtcactgcggaagcctgggtgcgtctg
caggcggccctgcccggcggcgacgcctcgcccgatcccatggcacgcctgcgacgcacg
acgcacgcgttagtggaggacctggatctggtcatctacatcgtcaacgagatgggcatg
gagggcgccgaacgcggaaacacctattacgccgcgccggaatgggagtcgttccaggcg
catctggatgcttttttcctgcacggtcagcagcgcggcgtgttcgggatcgaaatgccg
gcttcctggtggagcgacttctacctctcgtgcctgttcggggccggttgggcagtggcc
accggaaggctggcgcaggcgtcggtggtccgcgccgtcctgacctcgtttttggaaggc
gcacgttccggctccaggatgcagccctcgttgccgtaa
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