Xanthomonas oryzae pv. oryzae KACC 10331: XOO3193
Help
Entry
XOO3193 CDS
T00235
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XOO3193 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO3193 (uvrB)
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XOO3193 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
XOO3193 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
UB2H
Motif
Other DBs
NCBI-ProteinID:
AAW76447
UniProt:
Q5GXX4
LinkDB
All DBs
Position
complement(3427182..3429248)
Genome browser
AA seq
688 aa
AA seq
DB search
MLASVNSCSLPRDRSMTDRFQLVSPYSPAGDQPAAIDKLVANFEAGLAKQTLLGVTGSGK
TYTIANVVQQVQKPTLVMAPNKTLAAQLYGEFKSFFPHNAVEYFVSYYDYYQPEAYVPSS
DTFIEKDSSINEHIEQMRLSATKTLLSRRDSLVVATVSAIYGLGAPEDYLSLRLILSIGE
HIDQRQLIRHLTDLQYTRNEFELTRGAFRVRGEVLDVFPAESDTEALRIELFDGDIEQLT
LFDPLTGETLRKLQRYTVYPKTHYATTRERTLSAVDTIKEELKERLEQLYSQNKLVEAQR
LAQRTQFDLEMMAEVGFCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIP
QIGAMYKGDRSRKETLVEFGFRLPSALDNRPLRFEEWEARSPRSIYVSATPGPYELRESA
GEVTELVVRPTGLIDPVVEIRPVGTQVDDLMSEIHERIKLGDRVLVTTLTKRMAENLTEY
LGEHGIRVRYLHSDIDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVAILDADK
EGFLRSTGSLIQTIGRAARNLRGKAILYADKMTRSMQAAIDESDRRREKQVEYNLEHGIT
PESVERPISDIMEGAREDAAEKKSGKGRSKSRQVAEETPDYRAMKPAEIAGKLKSLEQKM
YQHAKDLEFEAAAQIRDQIQKLKTASLA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgttggcctccgtaaattcgtgcagcctcccccgagatcgttccatgaccgaccgtttt
cagctcgtatccccatactcgccagcgggcgaccagcctgccgccatcgacaagttggtg
gccaactttgaggctgggctggccaaacagacgctgttgggggtgaccggttcgggcaag
acctacaccattgctaacgtcgtccagcaggtgcagaagccgaccctggtaatggcgccg
aacaagacgctggcggcgcagttgtatggcgagttcaagtcgttcttcccgcacaacgcg
gtggagtacttcgtcagctactacgactattaccagccagaggcttacgtgccgtcgtcg
gacaccttcatcgagaaggacagttcgatcaacgaacacatcgagcagatgcgtttgtcg
gcgaccaagaccttgctgtcgcggcgcgattcgctggtggtggcgacggtgtcggcaatc
tatggcctcggcgcgccggaagactatttgtcgctgcgcctgatcctgtcgattggcgaa
cacatcgatcagcgtcagttgatccgtcatctcaccgacctgcagtacacccgtaacgag
ttcgagctcacgcgcggcgcttttcgcgtgcgcggcgaggtgctggatgtgttccctgcc
gagtcggataccgaggccctgcgcatcgagttgttcgatggcgacatcgagcagctgacg
ctgttcgatccgctcaccggcgagaccttgcgcaagctgcagcgctataccgtgtacccg
aaaacgcattacgccacgacgcgtgagcgcacgttgagtgcggtagacaccatcaaagaa
gagttgaaagagcggcttgagcagctctactcgcagaacaagttggtcgaggcgcagcgt
ctggcgcagcgcacgcagttcgatctggaaatgatggccgaagtgggtttctgcaacggt
atcgaaaactactcgcggcatctcaccggcaaggcacccggcgagccgccgccgaccttg
ttcgattacctgccgccggacgcgctactggtcatcgacgaatcgcacgtgaccattccg
cagatcggcgcgatgtacaaaggcgaccgctcgcgcaaggaaacgctggtggagttcggc
ttccgcttgccgtctgcgctggataaccggccgctgcggttcgaagagtgggaagcgcgt
tcgccgcgcagcatttacgtgtcagcgacaccgggtccttacgagttgcgcgagtcggct
ggcgaggttacggagttggtggtgcgcccgactggcttgatcgacccggtagtggagatc
cgtccggtgggcacgcaggtcgatgacctcatgtcggagattcacgaacgcatcaagctc
ggcgaccgcgtgctggtgaccacattgaccaagcgcatggccgaaaacctcaccgagtac
ctgggcgagcatggcattcgggtgcgctatctgcactcggatatcgacaccgtagagcgt
gtggaaatcattcgcgacctgcgtctgggcaaattcgatgtgctcgtcggcatcaatctg
ctgcgcgagggcttggacatgccggaagtgtcgctggtggcgatcctggatgccgacaag
gaaggcttcctgcggtcgaccggttcgctgatccagaccattgggcgcgccgcacgcaat
ttgcgcggcaaggccattttgtatgccgacaagatgacccgttcgatgcaggcagcgatc
gacgagagcgatcgccgccgtgaaaagcaggtcgagtacaacctggaacatggcatcacg
cctgaatctgtcgagaggccgatctccgacatcatggaaggtgcgcgcgaagatgcagcc
gagaagaagtcgggcaaggggcgttcgaagtcgcgtcaggtcgctgaggagacacccgat
taccgcgccatgaaacccgcggaaatcgccggcaagctcaagagcctggagcagaagatg
tatcagcacgcaaaggatcttgagttcgaggccgcagcgcaaatacgcgaccagatccag
aagctcaaaacggcaagcctggcctag
DBGET
integrated database retrieval system
