Xanthomonas oryzae pv. oryzae KACC 10331: XOO3216
Help
Entry
XOO3216 CDS
T00235
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xoo03016
]
XOO3216 (truB)
Enzymes [BR:
xoo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XOO3216 (truB)
Transfer RNA biogenesis [BR:
xoo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XOO3216 (truB)
Prokaryotic type
XOO3216 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AAW76470
UniProt:
Q5GXV1
LinkDB
All DBs
Position
complement(3454511..3455437)
Genome browser
AA seq
308 aa
AA seq
DB search
MKPRIAYRPLHGILLLDKPAGLSSNNALQAARRLLRAEKGGHTGSLDPLATGLLPLCFGE
ATKIAGLLLGSAKAYDAEIVLGVTTDTDDADGEPLRERAVPDVSEADLQVALAAFIGRIQ
QQAPIYSALKQGGEPLYAKARRGEVIDAPVREVEVQAIEVLGYSAPRLTLRVTCGSGTYI
RSLARDLGEVLGCGAHIASLRRLWVEPFRAPQMITLEGLATALEAGAEAQTVLLPIEAGL
ADFARIVLDAALAARFRMGQRLRDAAFPTGQVAVFGPDGSPSGLGLVDADGRLSPQRLFN
GLNEISVC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcgcttaccgcccgttgcacggcatcctgttgctggacaagccggcc
gggctcagttccaacaatgcattgcaggccgcgcgccgcttattgcgtgcagagaaaggt
ggccataccggtagcctggacccgctggccaccggcctgctaccgctctgctttggcgaa
gccaccaagatcgccggactgctgctcgggtcggccaaggcgtacgacgccgagatcgtg
ctgggcgtcaccaccgataccgatgatgccgacggcgagccgctgcgcgaacgtgcggta
cccgacgtgagcgaggccgatctgcaggtggcgctggcggctttcatcggccgcatccag
cagcaggcgccgatctattccgcactcaagcaaggcggtgagccgctgtatgccaaggcg
cggcgtggcgaggtcattgacgcgccggtacgtgaggtcgaggtgcaggcgatcgaagtg
ctgggctacagcgcgccgcgtttgacgctgcgcgtgacctgcggttcggggacgtatatc
cgcagcctggcgcgcgatctcggcgaggtgctgggctgcggcgcgcatatcgcgtcgttg
cgtcgactctgggtggagccgtttcgtgctccgcaaatgatcacgctggaggggttggcg
acagcgctggaagccggcgccgaggcgcagacggtgttgctgccgatcgaggccggcctg
gccgattttgcgcggatcgtgctcgatgcggctctcgcggcgcgtttccgcatggggcag
cgcttgcgcgatgccgcattcccgactggccaggtggccgtgttcgggcccgacggaagc
ccctcggggctgggcttggtggatgcggatggacgcttgtcgccacagcgattgttcaat
ggactgaatgagatttcagtatgttaa
DBGET
integrated database retrieval system
