Xanthomonas oryzae pv. oryzae KACC 10331: XOO3255
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Entry
XOO3255 CDS
T00235
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xoo03016
]
XOO3255 (truA)
Enzymes [BR:
xoo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
XOO3255 (truA)
Transfer RNA biogenesis [BR:
xoo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XOO3255 (truA)
Prokaryotic type
XOO3255 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Rv3766_C
Motif
Other DBs
NCBI-ProteinID:
AAW76509
UniProt:
Q5GXR2
LinkDB
All DBs
Position
complement(3492842..3493615)
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AA seq
257 aa
AA seq
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MRYALGVEYDGSEFQGWQQLGEHGGPSVQASLQAALSSVADAPVQVVCAGRTDAGVHGEC
QVVHFDSDAHREPRGWMLGTTARLPPSIAVRWCVPAAADFHARFSARARRYRYRLLNRQI
RPALYRQTLSWERRPLDADAMHVAAQALLGENDFSAFRSVQCQALHARRNLQAIHVQRIG
EVVEVQVQANAFLHHMVRNIVGSLILVGTGEQPADWIATLLAGRDRTVAGPTAPPQGLVF
IGPLYPAEWHLPAEVTQ
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgttacgcgctgggcgtggagtacgacggcagcgagttccagggctggcagcagttg
ggcgaacatggcggcccgagtgtgcaggccagcctgcaggcggcattgtcgtcggttgcc
gatgcgccggtgcaggtggtctgcgccggacgcaccgacgcgggcgtgcatggagaatgc
caggtggtgcatttcgacagcgacgcacaccgcgaaccgcgcggctggatgctgggcacc
accgcgcgtctgccgccgtcgatcgcggtgcgttggtgcgtgccggcagccgctgacttc
catgcgcgcttttccgcgcgcgcgcgccgttatcgctatcgcctgctcaatcggcagatt
cgcccggcgctgtatcggcagaccttgagctgggagcgtcgcccgctcgatgccgatgcc
atgcacgtggcagcgcaggccttattgggtgaaaacgacttcagcgcgttccgcagcgtg
cagtgccaggccttgcatgcccgccgcaacttgcaggccatccatgtgcagcgcatcggc
gaggtggtggaggtgcaggtgcaggccaatgcattccttcatcacatggtgcggaatatt
gtgggctcgctgattttggtcggtaccggcgagcagccggccgactggatcgcgacgttg
ctcgccgggcgcgaccgcactgtggccgggccgacagcgccgccacaaggtctggtattc
atcggacctctgtatcctgcagagtggcatctgcctgctgaggtgacccaatga
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