Xanthomonas oryzae pv. oryzae KACC 10331: XOO3315
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Entry
XOO3315 CDS
T00235
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xoo03019
]
XOO3315 (rng)
03009 Ribosome biogenesis [BR:
xoo03009
]
XOO3315 (rng)
Messenger RNA biogenesis [BR:
xoo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XOO3315 (rng)
Ribosome biogenesis [BR:
xoo03009
]
Prokaryotic type
rRNA processing factors
XOO3315 (rng)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
TLP1_add_C
CHP02642
Motif
Other DBs
NCBI-ProteinID:
AAW76569
UniProt:
Q5GXK2
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All DBs
Position
complement(3546927..3548429)
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AA seq
500 aa
AA seq
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MMSEEILVNVTPRETRVAVIENGMLQELHIERGWRRGVVGNIYKGKVQRVMPGMQAAFVE
VGLERAAFLHANDVIRLAPAPASVVDTEETPIPPPPPASVPIVELLRDGQDIVVQVVKDP
IGTKGARLTTQISIPSRYLVLLPQSKVVGVSARIEDEAERLRLKTIVSEVSAQHGGFGYI
IRTNAEGQPAEALAEDIAYLSRVWNVVERRGREAPPCSIIYEDLSLPLRAVRDLIRRDVE
KVKVDSNETFVQLQAFVAKYMPVLAERLELYTGDRPIFDLYGVEDEIGRALNKQVPLKSG
GYLVIDQTEAMTTIDVNTGSFVGQRNLEETVFRTNLEAAQAVARQLRLRNLGGIIIIDFI
DMDDSEHRRQVLRTLEKALARDHAKTTVYEFSPLGLVEMTRKRTVESLERQLSETCGQCG
GRGTIKTAETVTYEIFREITRAVRQFDAARLLVIASSKVVARITDEESAAVAELEEFLGK
SILFQSDDQYLQEQFDVVLL
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgatgtcggaagagatcttggtcaacgtcactccacgcgagacccgtgtggcggtgatc
gagaacggcatgctgcaggagctgcatatcgagcgcggttggcgccgaggcgtggtgggc
aatatctacaaaggcaaagtgcagcgggtgatgcccggcatgcaggctgcctttgtcgaa
gtagggctggagcgtgccgccttcctgcacgccaacgatgtgatccgtctggcgccggcg
ccggccagcgtggtcgataccgaagaaacgccgatcccgccgccaccgccggcctcggtg
ccgatcgtggagctgctgcgcgatggccaggacatcgtggtgcaggtggtcaaggacccg
atcggcaccaagggggcgcggttgaccacccagatcagcattccgtcgcgctatctggtg
ctgctgccgcagtccaaggtcgttggggtgtcggcgcgcatcgaagacgaagccgagcgg
ctgcgcctgaagaccatcgtcagcgaggtctcggcccagcatggcggcttcggctacatc
atccgcaccaatgccgaaggccagccggccgaggcgctggccgaggacatcgcgtatctc
tcgcgggtctggaacgtggtcgagcgccgcggccgcgaggcgccgccgtgcagcatcatc
tacgaagacctgagcctgccgctgcgtgcggtgcgcgacctgatccgccgcgacgtggaa
aaggtcaaagtcgattccaacgagaccttcgtgcaattgcaggccttcgtggccaagtac
atgccggtgctggccgagcggctggagctgtacaccggcgaccggccgatcttcgacctg
tacggcgtggaagacgagatcggccgtgcgttgaacaagcaggtgccgctcaagtccggg
ggctacctggtgatcgaccagaccgaagcgatgaccaccatcgacgtcaacaccggctcg
ttcgtcggtcagcgcaacctcgaagaaaccgtgttccgcaccaatctggaagccgcacag
gcggtggcgcggcaactgcgcctgcgcaacctgggcggcatcatcatcatcgacttcatc
gacatggacgactccgagcatcgtcgtcaggtgctgcgcacgctggagaaggcgctggca
cgcgatcacgccaagaccaccgtgtacgagttctcgccgttgggcttggtggagatgacc
cgcaagcgcaccgtcgaaagcctcgagcgccagctctcggaaacctgcggccaatgcggt
gggcgcggcaccatcaagaccgccgaaacggtgacctacgagatctttcgcgagatcacc
cgcgcggtgcgccagttcgatgccgcgcgcctgctggtgatcgcgtcgtcgaaagtggtc
gcgcgcatcaccgacgaagaatcggcagccgtggccgagctggaagagtttctcggcaag
agcatcctcttccagtccgacgaccagtatctgcaggagcagttcgatgtggtgctgctg
tga
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