KEGG   Xanthomonas oryzae pv. oryzae KACC 10331: XOO3461
Entry
XOO3461           CDS       T00235                                 
Symbol
hsdR-2
Name
(GenBank) type I restriction-modification system, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
xoo  Xanthomonas oryzae pv. oryzae KACC 10331
Brite
KEGG Orthology (KO) [BR:xoo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:xoo02048]
    XOO3461 (hsdR-2)
Enzymes [BR:xoo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     XOO3461 (hsdR-2)
Prokaryotic defense system [BR:xoo02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   XOO3461 (hsdR-2)
SSDB
Motif
Pfam: ResIII EcoEI_R_C SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 AAA_19 SNF2-rel_dom HTH_43 SLFN-g3_helicase UvrD-helicase
Other DBs
NCBI-ProteinID: AAW76715
UniProt: Q5GX56
LinkDB
Position
3699193..3702765
AA seq 1190 aa
MTTAAPVTYDGHREMPSRRAPSTDTRVTVDSNFSFLQEHDPVFFKLASMAEQVFASDPNT
TLIKLRQFAEALAQDLAGRAGILHDQRTTQADLIYQLARELRLDRRIQELFHVLRVEGNK
ATHGFTTQHREAMDGLKVARDLAVWYHRAFGRNAADFKAGAFVPPKDPAAPLRDVQAEVH
RLKAELDTARQQHDQSQALAELKSSEAKLNAELAEAMDIEARAQSALAVQREQELHRLRQ
DFEQRIASLQQPDTARQAATQQVADATQQVADATQQASNTFDLSEDLTRILIDQQLREAG
WEADSLDLTHAKGTRPEKGRNLAIAEWPTKVPRANADYVLFAGLTPVAVVEAKRKQINIA
DRIPQAERYARDFAMRGELAPAYPATTAIAGWADGQGGHFQVPLAFACNGRPFVKQLAEQ
SGIWFRDLRSPANLRRPLQKFHTPEDIADLLTRDRDQAERDLAQEGMAYLNLRDYQQRAI
QAVEGALASGARNCLLAMATGTGKTRTMIGLIYRLLKAERFHRILFLVDRSALGTQATET
MQDMQLEQNQTLAQIYNLDGLDDTRTADETRVQVATVQAMVRRIFQSDDPPPIGTFDCIV
VDEAHRGYTLDQEMTDGELAVRDHAQYLSQYRRVLDYFDACRIGLTATPAKHTTEIFGKP
IYTYSYREAVADDWLIDHEPPIRYTTALGKNGIHFDRGERVSVINTQTGDVDTADLEDEL
DFNIESFNRRVITANFDRVVCEQLAIELDPDGEEKTLIFCVNQPHAERVKHQLDEAFKQV
HGNYYNQASVAVITGKSDKVDQLIRNYKNERFPTIAITVDLLTTGIDVPRIANLVFMRRV
RSRILYEQMKGRATRRCDDIGKTVFRIFDPVDLYAALEDVDTMRPLVKDPNISIEQLVHE
LGQQRSYDAPGSNGGSHADDALDQLSQRIMRVLRKAQHRAEQRPDLRDKLSELETAWGVA
PAVLHTHLHKLGARNAASFLREHPRLVEQLADVGVLLGTDRYPVISEHTDTLLERAQNYG
VNEAPADYLDSFNAFIREQINQSAALSVIVNRPRDLTRAQLREVRLLLDQHGYSEAHLRG
AWRDSTQQEVAASIIGYIRRAALGEALVPFEQRVDKAMQGIYAQRNWTPVQRRWLKRLAQ
QLIHEVVLDRDTVQRNFSGDGGALQLDRLLDGRLDQILGDLGEHLWDQTG
NT seq 3573 nt   +upstreamnt  +downstreamnt
atgaccacggcagcaccggtgacctatgatggccaccgcgagatgccatcccgccgggcg
ccaagtacggatacgcgtgtgactgtcgacagcaacttttccttcctgcaggaacacgac
ccggtcttcttcaaactggcttcgatggccgagcaggtctttgccagcgatcccaacacc
accctgatcaagctcaggcagttcgccgaagcgcttgcccaggatctcgctgggcgcgcc
ggcattctccacgaccagcggacaacccaggcggatctgatctaccagctcgcacgcgag
ctgcgcctggaccggcggatccaggagctgttccacgtgctgcgggtcgagggcaacaag
gcgacccacggcttcaccacgcaacaccgcgaagcgatggatggcctgaaggtcgcccgc
gacctggcggtctggtaccaccgggccttcggcaggaacgccgccgacttcaaggccggg
gctttcgtgcccccgaaggatccagccgcgccgttgcgtgacgtgcaggccgaggtccat
cgcctgaaagcggagctggataccgcccgccagcagcacgaccagagccaggcgctcgcc
gaactcaagagcagcgaagccaaactcaacgccgagctcgccgaagcgatggacatcgaa
gcgcgtgcgcagtcggcgctggcagtccaacgcgaacaggaactgcaccggctgcgccag
gacttcgaacaacgcatcgccagcctgcaacagccggacaccgcccgccaggccgccacc
caacaggtcgccgacgccacccaacaggtcgccgacgccacccagcaggccagcaacacc
ttcgacctcagcgaagacctcacccgcatcctgatcgaccaacagctgcgcgaggccggc
tgggaagccgactcgctcgacctcacccacgccaagggcacccgcccggaaaaaggtcgc
aatctcgccatcgccgagtggcccaccaaggtgccgcgcgccaacgccgactatgtgctg
ttcgccggcctcacgccggtcgccgtcgtcgaggccaagcgcaagcagatcaacatcgcc
gaccggattccccaggccgagcgctacgcgcgcgactttgcgatgcgtggcgagctggcc
cccgcctacccggccaccaccgcgatcgcaggctgggccgacggccagggcggccatttc
caggtgccgctggcattcgcctgcaatggccgtcctttcgtgaagcagctggccgagcaa
tcgggcatctggttccgcgacctgcgctcaccggccaatctgcggcgcccgctgcagaag
ttccacacgcccgaggacatcgccgatctgctcacccgcgatcgcgaccaggccgagcgc
gacctggcccaggaaggcatggcctacctcaacctgcgcgactaccagcagcgcgcgatc
caggcagtggaaggcgcgctggcatcgggcgcacgcaactgcctgctggcgatggcgacc
ggcaccggcaagacacgcacgatgattggcctgatctaccgcctgctcaaggccgagcgc
ttccaccggattctgttcctggtcgaccgctccgcgctcggcacccaggccaccgagacg
atgcaggacatgcagctggagcagaaccagacgctggcgcagatctacaacctcgatggc
ctggacgacacccgcaccgccgatgagacccgcgtgcaggtcgccacggtgcaggccatg
gtccggcgcattttccagtccgatgacccgccaccgatcggcaccttcgactgtatcgtc
gtcgacgaggcccaccgcggttacacgctcgaccaggaaatgaccgacggcgaactggcc
gtgcgcgaccacgcgcaatacctgtcgcaataccgccgcgtgctcgactacttcgatgcc
tgccgtatcggcctgaccgccacgccggccaagcacaccaccgaaatcttcggcaagccg
atctacacctacagctaccgcgaagccgtggcagatgactggctgatcgaccacgagccg
cccatccgctacaccaccgcgctcggcaagaacggcatccacttcgaccgcggcgagcgc
gtgagcgtcatcaacacgcagaccggcgacgtcgataccgcagacctggaagacgaactc
gacttcaatatcgagtcgttcaaccggcgtgtgatcaccgcaaacttcgaccgggttgtc
tgcgaacagcttgccatcgaactggacccggacggcgaggaaaagaccctgatcttctgc
gtcaatcagccccacgccgaacgcgtcaagcaccagctggacgaggccttcaaacaggtc
catggcaattactacaaccaggccagcgtcgcggtgatcaccggcaaaagcgacaaggtc
gaccagctgatccgcaactacaagaacgagcgcttccccacgatcgccatcaccgtcgac
ctgctgaccaccggcatcgatgtgccgcgtatcgccaacctggtgttcatgcgccgggtc
cgctcgcgcatcctctacgaacagatgaagggccgcgccacccgccgctgcgacgacatc
ggcaagaccgtgttccgcatcttcgatccggtcgatctgtacgccgcgctcgaagatgtc
gacaccatgcgcccactggtcaaggaccccaacatcagcatcgagcagctggttcacgag
ctcggccagcagcgcagttacgatgcccccggcagcaacggcggcagccatgccgacgac
gcactcgaccagttgagccagcgcatcatgcgcgtgctgcgcaaggcccagcatcgcgcc
gagcagcgcccggatttgcgcgacaagctcagcgagttggaaaccgcctggggcgtagcg
cccgccgtgctgcatacccacctgcacaagctcggcgcgcgcaatgccgccagcttcctt
cgcgaacacccgcgcctggtggagcaactggcggacgtgggcgtgctgctgggcaccgac
cgctacccggtcatttccgaacacactgacaccctgctcgaacgcgcgcagaactacggc
gtcaacgaagccccggccgattacctggacagcttcaacgccttcatccgcgagcagatc
aaccagtccgccgcgctcagcgtcatcgtcaaccgcccccgtgacctcacccgcgcccag
ctgcgcgaggtacgcctgctgctcgaccagcacggctacagcgaggcccacctgcgcgga
gcctggcgcgacagcacccagcaggaggtcgccgccagcatcatcggctacatccgccgt
gccgcgctgggcgaggcattggtgccgttcgagcagcgtgtcgacaaggccatgcagggc
atctatgcccagcgcaactggacgccggtgcaacggcgctggctcaagcggctggcccag
cagctgatacacgaggtggtactggaccgcgacaccgtgcaacgcaacttcagcggcgac
ggcggtgccctgcagttggaccgcctgctcgatggccggctggaccagatcctgggcgat
ctgggcgagcatctgtgggatcagaccggctga

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