Xanthomonas oryzae pv. oryzae KACC 10331: XOO3547
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Entry
XOO3547 CDS
T00235
Symbol
gcvP
Name
(GenBank) glycine decarboxylase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00260
Glycine, serine and threonine metabolism
xoo00630
Glyoxylate and dicarboxylate metabolism
xoo00670
One carbon pool by folate
xoo00785
Lipoic acid metabolism
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01200
Carbon metabolism
Module
xoo_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XOO3547 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XOO3547 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
XOO3547 (gcvP)
00670 One carbon pool by folate
XOO3547 (gcvP)
Enzymes [BR:
xoo01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
XOO3547 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AAW76801
UniProt:
Q5GWX0
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All DBs
Position
3817279..3820308
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AA seq
1009 aa
AA seq
DB search
MGRTRASCQLRCGSTIRLPLPRMPAMSQTPSSLRDLEHHSAFVERHIGPNDAEIAQMLEV
VGHASLDALTDAIVPGNIKSPAPLALPEALTEEEALVKIRAIADKNTVYRNFIGQGYYGT
HTPKVILRNILENPAWYTAYTPYQAEISQGRMEALINFQTLCADLTGMQIANASLLDEAT
AAAEAMTLAKRSAKSRSDIFFVHDAVHPQTLELLRTRAEPLDIMLRVGTPEEALQAECFG
VLLQYPDSFGHIGDHAALAEAVHAQGGLVAVATDLLALTLIAAPGQWGADIVVGNSQRFG
VPFGFGGPHAAFMACRDAYKRSMPGRLIGVSIDAAGNPAYRLTLQTREQHIRREKATSNI
CTAQVLLAVMASMYAVYHGPDGLTRIARRTHRLAAILAAALRGAGVTVGEHFFDTLHVKA
IDADAIHARARAAGINLRAIDSEAVGISLDETTTRADVVALAQLFGAMADVDALDAATAD
ALPQGLLRSSAFLTHPVFNTHHSEHELLRYMRSLADKDLAMDRTMIPLGSCTMKLNATAE
MIPVTWPEFGAIHPLAPAEQSAGYAQLIDELEAMLVECTGYDAVSLQPNSGAQGEYAGLL
AIRAYHRSRGEAHRDICLIPESAHGTNPASAQMCGMTVVVTKCDANGNVDVDDIRAKAEK
YSDRLAALMITYPSTHGVFEEDVVAICEAVHAHGGQVYTDGANMNALVGVAKPGKWGSDV
SHLNLHKTFCIPHGGGGPGVGPCAVKSHLAPFLPRAGLHAGEGQTAAIHGGGFNSGSGSG
HSSRIGGMVSAAAYGSASILPISWMYVTMMGSAGLRKATQVALLNANYIAKRLAPHYKTL
YTGRNGLVAHECILDVRPLEKTSGIGAEDIAKRLIDFGFHAPTLSFPVAGTLMVEPTESE
SQHELDRFIDAMIQIREEIRAIEDGRLDREDNPLKHAPHTATQVSASEWTHAYPRELAAF
PLPSLKQQKYWPPVARVDNVYGDKNVMCACIPVDAYKIPVDAYKEDAEA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
gtggggcgcacgcgcgcgtcatgccagttgcggtgcgggtcgaccattcgtctgcccctg
ccccggatgcccgccatgtcccagaccccctcttccctgcgcgacctcgaacaccacagc
gcgttcgtcgaacgccatatcggccccaacgacgcggaaatcgcgcagatgctggaggtg
gtcggccacgcctcgctggatgcgctgaccgatgccatcgtgccgggcaacatcaagtcg
cccgcaccactggcgctgcccgaggcgctcaccgaagaagaagcactggtcaagatccgc
gccatcgccgacaagaacaccgtgtaccgcaacttcatcggccagggctactacggcacc
cacacgccgaaggtcatcctgcgcaacatcctggaaaaccccgcctggtacaccgcctac
acgccgtaccaggcggaaatctcgcaaggccgcatggaggcgctgatcaacttccagacc
ctgtgcgccgacctcaccggcatgcagatcgccaacgcctcgctgctggacgaagccacc
gccgcggccgaagcgatgacgctggccaagcgttcggccaagtccaggtccgacatcttc
ttcgtgcacgacgcggtgcatccgcagacgctggaactgctgcgcacgcgcgccgagccg
ctggacatcatgctgcgcgtcggcaccccggaagaagcgctgcaggccgagtgcttcggc
gtgttgctgcagtacccagacagcttcggtcacatcggcgatcacgctgcactggcagaa
gccgtgcacgcacaaggcggactggtcgcagtggccaccgatctgctggcgctgaccttg
atcgccgccccgggccaatggggtgcggacatcgtggtcggcaactcgcagcgcttcggc
gtgccgttcggtttcggtggcccgcatgccgccttcatggcctgccgcgacgcctacaag
cgctcgatgcccggccgtttgatcggcgtgtcgatcgatgccgccggcaacccggcgtat
cgcttgaccctgcagacccgcgagcaacatatccgccgcgaaaaggccacgtccaacatc
tgcactgcgcaggtgctgctggcggtgatggcgtcgatgtatgcggtgtatcacggcccc
gatgggctgacccgcatcgcgcgtcgcacccatcgcctggccgccattctggctgccgca
ttgcgtggcgctggcgttaccgtgggcgagcatttcttcgatacgctgcacgtcaaggcg
atcgatgccgatgccatccacgcccgtgcgcgtgcggccggtatcaatctacgcgccatc
gacagcgaagcggtcggcatcagcctggatgaaaccactacgcgcgccgacgtggttgcg
ctggcccagctgttcggtgccatggccgatgtggacgcactcgatgcggccaccgccgat
gccctgccccaaggcctgctgcgcagcagtgccttcctgacgcacccggtgttcaacacc
caccacagcgaacacgaactgctgcgttacatgcgctcgctggccgacaaggatctggcg
atggatcgcaccatgatcccgctgggcagctgcaccatgaagctcaatgccaccgctgaa
atgattccggtgacctggcccgagttcggcgccatccatccgctcgcaccggcagaacaa
tcggccggctacgcgcagctgatcgacgaactggaagcgatgctggtcgagtgcaccggc
tacgacgcggtgagcctgcaacccaattccggtgcgcagggcgaatatgccggcctgctg
gcgatccgcgcgtatcaccgttcgcgcggtgaagcgcatcgcgatatctgcctgattccc
gaatccgcgcacggcaccaacccggcctcggcgcagatgtgcggcatgaccgtggtggtg
accaagtgcgacgccaacggcaacgtggacgtggatgacatccgcgccaaggcggagaaa
tattccgaccgtctcgcggcgttgatgatcacctacccctccacgcacggcgtgttcgaa
gaagacgtggtggccatctgcgaagcggtgcatgcccatggcggccaggtctacaccgac
ggcgccaacatgaacgcgctggttggcgtggccaagcccggcaagtggggctcggacgta
tcgcacctcaatctgcacaagaccttctgcatcccgcacggcggcggcggcccgggcgta
ggcccgtgtgcggtgaagtcgcatttggcgccgttcctgccgcgtgccggcctccatgcc
ggcgaaggtcaaactgccgccatccatggcggcggattcaactccggaagcgggagtgga
cactcctcgcgcatcggcggcatggtcagcgcggccgcctacggctccgcctcgatcctg
ccgatcagctggatgtacgtgaccatgatgggcagcgccggtctgcgcaaggccacgcag
gtggcactgctcaacgccaactacatcgccaagcgtctggcaccgcattacaagacgctc
tacaccggccgcaacgggctggtggcgcatgagtgcattctcgatgtgcgccctctggaa
aagaccagcggcatcggcgccgaagacatcgccaagcggctcatcgacttcggcttccac
gcaccgacgttgagcttcccggtcgccggcacgctgatggtggaaccgaccgaaagcgaa
tcgcagcacgaactggaccgcttcatcgacgcgatgatccagatccgcgaagagatccgc
gccatcgaagacggccgtctggaccgcgaggacaacccgctcaagcacgcaccgcatacc
gcaacgcaggtgtcggccagcgagtggacccacgcttacccgcgcgaactggccgccttc
ccgctgcccagcctcaagcagcagaagtactggccgccggtggcgcgcgtggacaacgtg
tatggcgacaagaacgtgatgtgcgcgtgcatcccggtggatgcgtataagatcccggtg
gatgcgtataaggaagatgccgaagcctga
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