Xanthomonas oryzae pv. oryzae KACC 10331: XOO3853
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Entry
XOO3853 CDS
T00235
Symbol
ribA
Name
(GenBank) riboflavin biosynthesis protein
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00740
Riboflavin metabolism
xoo00790
Folate biosynthesis
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01240
Biosynthesis of cofactors
Module
xoo_M00125
Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
XOO3853 (ribA)
00790 Folate biosynthesis
XOO3853 (ribA)
Enzymes [BR:
xoo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
XOO3853 (ribA)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
XOO3853 (ribA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
AAW77107
LinkDB
All DBs
Position
complement(4113262..4114401)
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AA seq
379 aa
AA seq
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MNFAPVPALLEELRAGRMVVIVDDEDRENEGDLIMAAELVTPSDINFMVTHARGLVCLSL
TGERCAQLGLAPMVRNNTAQFQTNFTVSIEAAEGVTTGISAYDRAHTVRTAVRPDAKPQD
LSQPGHIFPLISQPGGVLTRAGHTEAASDLSMLAGLEPAGVLVEVLNPDGSMARRPQLEV
FAREHGLKMGSIADLIAYRLANEHTVERVDERDITTEFGPFKLVTYRDRIAHDLHFALVR
GSADPHTPTLVRVQVENPLADLLHWQRDDFGVAATDALRAIAAEGQGVMVVLSAPRDSES
LLARLRQQPEAAANAKDVSQWRRHGAGAQILAELGLGKLRVLGTSRRQVGVAGFGLEVVE
YLECHAGEGVRSVPPSAVS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgcgcccgttcccgcgttgctcgaagagctgcgcgccggtcgcatggtggtg
atcgtcgatgacgaagaccgcgaaaacgaaggcgatctgatcatggccgccgagttggtc
acgccctcggacatcaacttcatggtcacccacgcgcgtggattggtttgcctgtcgctg
accggcgagcgctgcgcgcaactgggcctggcgccgatggtgcgcaacaacaccgcgcag
ttccagaccaacttcaccgtcagcatcgaggcggccgaaggcgtaaccaccggcatttcc
gcttacgaccgcgcacataccgtgcgcaccgcggtgcgtccggatgccaagccgcaggat
ctgagccagccggggcatatcttcccgctgatttcgcagcccggtggcgtgctgacccgc
gccggccacaccgaagcagccagcgatctgtcgatgctggccgggctggaaccggccggt
gtgctggtggaagtgctcaaccctgacggcagcatggcgcgtcgcccgcagttggaagta
tttgcgcgcgaacacgggttgaagatgggctcgatcgccgatctgatcgcgtatcggctg
gccaacgagcacaccgtcgagcgcgtggacgagcgcgacatcaccaccgaattcggcccg
ttcaagctggtgacctaccgcgaccgcatcgcgcacgacctgcactttgcgttggtgcgc
ggcagcgccgatccgcatacacccaccctggtgcgggtgcaggtggaaaatccgctggcg
gatctgctgcactggcagcgcgatgacttcggtgtggcggccaccgatgccttgcgcgcg
attgcggccgaggggcagggcgtgatggtggtgctgtcggccccgcgcgacagcgaatcg
ctgctggcacggctgcgccagcaacccgaagccgccgccaacgccaaggatgtgagtcag
tggcggcgtcatggcgccggcgcgcagatcctggccgaactgggcctgggcaagttgcgt
gtgctgggcacttcgcggcgccaggtgggggtggccgggttcgggctggaagtggtggag
tatctggaatgccacgctggcgagggcgtgcgttcggtgccgccgtctgctgtctcttga
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