KEGG   Xanthomonas oryzae pv. oryzae KACC 10331: XOO3856
Entry
XOO3856           CDS       T00235                                 
Symbol
ribD
Name
(GenBank) riboflavin-specific deaminase; 5-amino-6-uracil reductase
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xoo  Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00740  Riboflavin metabolism
xoo01100  Metabolic pathways
xoo01110  Biosynthesis of secondary metabolites
xoo01240  Biosynthesis of cofactors
xoo02024  Quorum sensing
Module
xoo_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xoo00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    XOO3856 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XOO3856 (ribD)
Enzymes [BR:xoo01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     XOO3856 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     XOO3856 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AAW77110
UniProt: Q5GW11
LinkDB
Position
complement(4116240..4117349)
AA seq 369 aa
MSETAAIASADDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHA
EVFALRAAGELARGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGG
FALLRDAGIEVLSGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGQSKWI
TGADARADVQRWRARAGAILTGAGTVLADDPSMTVRLGDDIACVPPLRVVLDAGLRTLAC
KNIRNGDAPTLYLHGDAVAATALDGAECAALPLHVGRFDLSAVLALLAERGINEVHVEAG
ATLSGALLQAGLVDELLVYMAPVLLGDTARPLLAGLGIETMAQRYELQLRDVRQLGQDLR
LRYAPSAVV
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtgagaccgcggcgatcgcgagtgccgatgaccaccgctggatggcgcaggcgttg
cgcttggccgagcgcggcgcctacaccacccgccccaatccgatggtgggctgcgtgatt
gtgcgcgatggcgtgtgcgtgggcgaaggctttcatcaacgtgcgggtggcccgcatgcc
gaagtcttcgcgttgcgtgcggccggtgagttggcgcgcggtgccactgcgtatgtgacc
ctggagccatgcgcgcattacgggcgcacgccgccgtgtgcgttggcgttgatcgaggca
ggcgtaacgcgtgtggtcgcggcgatggccgatccgtttccgcaggtcaatggcggtggt
tttgcgttgctgcgcgacgctggaatcgaggtgctcagcggggtgatgcacgcgcaggcg
cgcacgctcaatcagggctttctgtcgcgggtggagcgtggccggccgtggctgcgggtc
aaactgggcgccagccttgacgggcggaccgcgttggccagcggccaatccaaatggatc
accggagccgacgcgcgtgcggacgtgcagcgttggcgtgcgcgtgccggcgcaatcctc
actggtgctggcacggtgttggccgatgatccgtcgatgacggtgcggctgggcgatgac
atcgcgtgcgtgccaccgctgcgtgtggtgctggatgccggcttacgcacgttggcgtgc
aagaacatccgcaatggcgatgcgccgacgctgtatctgcatggcgatgctgtcgctgca
accgcgctggatggtgcggaatgtgcggcactgccattgcacgtgggccgtttcgatctg
tccgcagtgctggcgttgctggccgagcgcggcatcaatgaagtgcatgttgaagccggc
gccacgctgagtggtgcgctgttgcaggccgggctggtggacgaactgctggtctacatg
gcgccggtgttgctgggcgacaccgcaaggcccttgctcgctggccttggcatcgaaacg
atggctcagcgctacgaattgcaactacgcgatgtacgtcagctcgggcaggatctgcgt
ttgcgttacgcgccatcagcggtggtatga

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