Xanthomonas oryzae pv. oryzae KACC 10331: XOO3860
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Entry
XOO3860 CDS
T00235
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo00260
Glycine, serine and threonine metabolism
xoo00460
Cyanoamino acid metabolism
xoo00630
Glyoxylate and dicarboxylate metabolism
xoo00670
One carbon pool by folate
xoo00680
Methane metabolism
xoo01100
Metabolic pathways
xoo01110
Biosynthesis of secondary metabolites
xoo01120
Microbial metabolism in diverse environments
xoo01200
Carbon metabolism
xoo01230
Biosynthesis of amino acids
xoo01240
Biosynthesis of cofactors
xoo04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
XOO3860 (glyA)
09102 Energy metabolism
00680 Methane metabolism
XOO3860 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
XOO3860 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
XOO3860 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
XOO3860 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
XOO3860 (glyA)
Enzymes [BR:
xoo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
XOO3860 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Phage_capsid
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AAW77114
UniProt:
Q5GW07
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All DBs
Position
complement(4118881..4120134)
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AA seq
417 aa
AA seq
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MFSRDVRLETYDPELAKAIAAEAGRQEDHVELIASENYCSQLVMEAQGSQLTNKYAEGYP
GKRYYGGCAFVDIAEQLAIDRIKQVFDADYANVQPHSGSQANQAVYLALLQPGDTILGMS
LAHGGHLTHGAKANVSGKLFNAVQYGVNEQGLIDYDEVQRLATEHTPKMVVAGFSAYSQK
IDWARFRAIADSVGAYLFVDMAHIAGLVAAGVYPSPMEHAHVVTSTTHKTLRGPRGGIIV
AKGASEELQKKLQSIVFPGIQGGPLMHVIAAKAVAFKEALEPAFKTYQQQVVKNAQAMAN
TLIARGYKIVSGGTENHLMLVDMIGRDVSGKDAEAALGKAHITVNKNAVPNDPRSPFVTS
GLRLGTPAITTRGYKEPDSIDLANWIADVLDAPTDEAVLAKVRDAVTAQCKRYPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgcgcgatgtccgactggaaacctacgaccccgaactggccaaggccatcgct
gctgaagccggccgccaggaggatcacgtcgagctgatcgccagcgagaactactgcagc
cagctggtgatggaagcccagggcagccagctgaccaacaagtacgccgaaggctaccct
ggcaagcgctactacggcggctgcgcgttcgtcgacattgccgaacagctagcgatcgac
cgcatcaagcaggtcttcgatgccgattatgcaaatgtgcagccgcacagcggctcgcag
gccaaccaggcggtgtatctggcgctgctgcagccgggcgacaccattttgggcatgagc
ctggcgcatggcggccacctgacccacggcgccaaggccaacgtctccggcaagctgttc
aacgcggtgcagtacggcgtcaacgagcagggcctgatcgattacgacgaagtgcagcgt
cttgcgaccgagcacacgccgaagatggtggtggccggtttctcggcgtattcgcagaag
atcgactgggcccgcttccgtgccattgccgacagcgttggcgcctatctgttcgtggac
atggcccacatcgctggcctcgtggccgccggggtgtatcccagcccgatggaacatgcg
cacgtggtgacgtcgacgacgcacaagacgctgcgcggtccgcgtggcggcatcatcgtc
gccaagggcgccagcgaagaattgcagaagaagctgcagtcgatcgtgttccccggcatt
cagggtggcccgctgatgcacgtgatcgccgccaaggcggttgcgttcaaggaagcactg
gagccggcgttcaagacctaccagcaacaggtggtcaagaatgctcaggcgatggccaac
acgctgatcgcacgcgggtacaagatcgtctccggcggcaccgaaaaccatctgatgctg
gtcgacatgatcggccgcgacgtctccggcaaggatgccgaagccgcgctgggcaaggcg
cacatcaccgtcaacaagaacgcggtgcccaacgacccgcgctcgccgttcgttacctcg
ggcctgcgcttgggtaccccggcaatcaccacgcgcggttacaaggaaccggacagcatc
gatctggccaactggatcgccgatgtgctcgacgccccgaccgacgaagcggtgctggcg
aaagtgcgcgatgcagtgaccgcgcagtgcaagcgttatccggtgtacggctga
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