Xanthomonas oryzae pv. oryzae KACC 10331: XOO3912
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Entry
XOO3912 CDS
T00235
Symbol
hmsF
Name
(GenBank) HmsF protein
KO
K11931
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase [EC:3.5.1.-]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
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Gene cluster
GFIT
Motif
Pfam:
GHL13
Polysacc_deac_1
A-sol_ELP1
Motif
Other DBs
NCBI-ProteinID:
AAW77166
UniProt:
Q5GVV6
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Position
4173147..4175138
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AA seq
663 aa
AA seq
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MNTVRVGHVRSMTAGANVISASMPQCTGESEMEITLRNLMRVLVLALLMSILPVQAKSPV
DPDAVDNGLLVLSYHDIRDDVRENADADAFAVSTQNFAAHLDWLSAHDYHPISLSQLIKA
SQGKATLPPRAVLLTFDDGLRSMYTRVYPLLRAYHYPALVAVITDYVDMAPDRTIDYGYR
PFGHDDFLTWDQLREMLASGLIEVASHTDNLHHGVQSNPYGNQAPAVNTRIYDPTTQRYE
DVGQYAERLRQDLARSVERIEHQLGVRPRAIVWPYAAYNQMSNDIAEQLGMPVSFDLEGR
STPVTHDLHGLARLLVTNNPTVTGLAFELRRNPALDGTRALQIDLDSLYDSDPAQQARNL
DTLIDRVKRIGPTHVYLQAFADPDGNNTASALYFPNRHMPMREDLFNRVAWQLKTRAGVK
VYAWLPVLGYELPDLKQREALRIHSTERDGMYRLDFTNPQARQIIKDIYEDLAINSYMEG
ILFHDDGYLRDTELPQLPQEGHDGLRTQALIDFTMELRDSAQRWRPKLGTVRNLYAQPVL
QPQSAAWFAQRLDLFNRAYDRTALMAMPWMEGSHDPERWLDTLVSAVRAQDPEMKHTLFE
LQTVDWHTQTPISGERLIAQIHRLQSQGVRHFAWYPDDFIGNRPSTEDARAAMSARNFPY
PDK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
ttgaatacggtgcgagttggtcacgtccggtctatgacggccggcgcgaacgtcatctcg
gcgtcgatgccgcaatgcactggggagagtgagatggaaataacgcttcgcaatctgatg
cgcgtacttgtgttggctctgctgatgtcgatcctgcccgtgcaggccaagtcgccggtc
gacccggatgccgtcgacaatggcctgctggtcctgagctaccacgacatccgcgacgat
gtgcgcgagaacgccgatgccgatgcctttgcagtcagcacccagaacttcgccgcgcac
ctggactggctgtcggcgcacgactaccaccccatttcgctctcgcaactgatcaaggcc
tcgcagggcaaagcaacactgccgccgcgggcggtgctgctcaccttcgacgacggactg
cgcagcatgtacacccgcgtctatccgctactgcgcgcctatcactatccggcgctggtg
gcggtgatcaccgactacgtggacatggcgcctgatcgcaccatcgactatggctaccgc
ccgttcggccacgacgatttcctcacctgggaccaattgcgcgagatgctggccagcggc
ctgatcgaagtggccagccataccgacaacctgcatcacggggtgcagtccaatccgtac
ggtaaccaggccccggcggtgaatacccggatctacgaccccacgacacaacgttacgag
gacgtcgggcaatacgccgagcgcctgcgccaggacctcgcccgcagcgtggaacgcatc
gagcatcagcttggcgtgcgcccacgggcgatcgtgtggccatatgcggcctacaaccag
atgagcaacgacatcgccgagcaactcggcatgccggtctccttcgatctggaaggccgt
agcacgccggtcactcacgacctgcatggcctggcacgcctgctggtgaccaacaatccg
accgtgacaggactggcgttcgaactgcgtcgcaaccctgcactggatggaacgcgcgcg
ctgcagatcgatctcgattcgctctacgacagcgatccggcgcagcaggcccgcaacctg
gacacgctgatcgacagggtcaaacgcatcggcccgacccacgtctatctgcaggccttc
gccgatccggacggtaacaacaccgccagtgcgctgtacttccccaaccggcacatgccg
atgcgcgaggatctgttcaatcgcgtcgcctggcagttgaagactcgtgccggagtgaag
gtctacgcctggctgccggtgctcggctatgaactgcccgacctgaagcaacgcgaggca
ctgcgcatccacagtaccgaacgcgacggcatgtaccgcctggatttcacaaacccgcag
gcacggcagatcatcaaggacatctacgaagacctggccattaactcgtacatggaaggc
attttgttccatgacgatggctacctgcgcgacaccgaattaccgcagttaccgcaggaa
ggccacgacggtctccgcacccaggcgctgatcgacttcactatggaactgcgcgacagc
gcgcaacgctggcggccgaagctgggcacggtgcgcaatctttacgcacaaccggtcctg
caaccgcagagcgccgcctggttcgcccaacgcctggatctgttcaaccgggcctatgac
cgtaccgccctgatggccatgccgtggatggagggcagccacgacccggaacgctggctg
gacactctggtgtcggccgtccgcgcgcaagacccggaaatgaaacacaccctgttcgaa
ctgcagacggtggactggcacacccagacgccgatcagcggcgagcgcttgatcgcgcag
atccaccgcctgcagtcgcagggcgtgcgccattttgcgtggtatccggatgacttcatc
ggcaacaggccgtcgacggaggacgcacgagcggcgatgtccgcgcgcaacttcccttac
ccggacaagtga
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