Xanthomonas oryzae pv. oryzae KACC 10331: XOO4471
Help
Entry
XOO4471 CDS
T00235
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xoo
Xanthomonas oryzae pv. oryzae KACC 10331
Pathway
xoo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xoo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XOO4471 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xoo03400
]
XOO4471 (recC)
Enzymes [BR:
xoo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XOO4471 (recC)
DNA repair and recombination proteins [BR:
xoo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XOO4471 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AAW77725
UniProt:
Q5GU98
LinkDB
All DBs
Position
complement(4763904..4767410)
Genome browser
AA seq
1168 aa
AA seq
DB search
MSCGLAFQRGHRAPTPQQTTLHARIRHNAPRMHANSAPDFRLYPSNALDTLAALLAQELR
RPMPGQPLLQPEVVLIPQVAMRRWLQSTLAAEHGVAANLEFLTPGEFVARALERNLGAAD
DDLDMATTQWRLYATLQSDLGRDAALAPLADYLADGDALKPWALAGELGSVFEKYQAWRR
DWLLRWEAGADPDDPQARLWRSIATGRQYRARRIGHYLDRHARADGPLPQGLPPRVFAFA
ILNISPDVLRVLATQARVGTLHFYLPTPTQGYWGDLQTLRQRRREDGAVQLFAEHVQENP
LLQAWGAAGRDFMALVGDYEVVHPLAEITAYADPLDSGRRTLADGGLGDSLLRRMQSDLF
HRRAPAVPALLPAVNLHDPSLQVHACHTRLRELQVLHDQLRALLDDPRFDPPLQPREIAV
LSPNIDPYVPYLDAVFGSHGNDDALPYALADASPLASEPLAEVFLTLLGLPIARFGLHEI
LDLLASAPIAAAAGLDEAGLERLRSWLHAAGARWGLDAAHRRQHQAPGDDAYTWRFALDR
LLLGHASGADDDIDGVAPWPQLEGSALAALDTLLRLLRVLERHQAVLADAMTPVEWRERL
LGLLEALIPTTPTAPRAQRALDRLRTMIDQFARDAVRADYAGKVPAEVVRAHFAAVLGES
DTRAPLLTGGISFGRMVPMRLLPFRVICLLGMNDGDFPRRDPAAGLNRLTAELGTDRRRH
GDRSTREDDRFLFLQLFASAQEVFYLSYLGADARDGSVREPSVLVSELLSSAAHYHAASN
ALDTLVVRHPLQPFAAAAFGALGDESDAGADPRRFSYRRQWRPAVDSLVGQRQPLAPWVA
GALPADDTALQASVSIDELRRLFADPAGQFLRHRLGMRLPDPGGEDSDLEPLLAPTRGLD
QYGLQQQVFEAALAGDTEGLYERLRARALLPSGPLGRRQLDERVAQLRPYADAFRQWRGQ
SPAESRRLQVQIGDIELHARVPGWYASGVGRVQVGALSGRSAIRHGLEWLLLRAAGEHAP
YVRFFEHEDGLGPHPIDVQPLSQPQAQTALAELLQLYRHGLQTPLAFAPYSSWKYHQAAR
GDDLDKAIKDAAGQWQSGFGWSESHSPELRLVNRGRDPFADAQRFADFATTSHRVYALLE
QGDSGAPLDAERLIDSWRHWHGAQEDAE
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgtgcggccttgcgtttcagcgcggccaccgggcgccgacaccgcagcaaacaacg
cttcacgcgcgcatccggcacaatgcgccacgcatgcacgccaattccgcgcccgatttc
cgtctttatccatccaatgcgctggataccctggccgccttgctcgcgcaggagttgcgc
cggccgatgccggggcagccgttgctgcagccggaggtggtgctgattccgcaggtggcg
atgcggcgctggctgcagtccacgttggcggccgagcacggtgttgcggcgaatctggaa
tttctcacgcccggcgaattcgttgcgcgtgcgctggagcgcaacctcggcgcggccgac
gacgacctggacatggccaccacgcagtggcggttgtatgcgaccctgcaatcggaccta
ggccgcgatgcggcgttggcacccctggccgactatctggccgatggcgatgcactcaag
ccgtgggcgctggccggcgagttgggcagcgtgttcgaaaaataccaggcatggcgccgc
gactggctgctgcgctgggaagcgggcgccgacccggacgacccgcaagcccggttgtgg
cgcagcatcgccaccggccgccaataccgcgcacggcgcatcggccactatctggatcgc
catgcgcgcgccgatggcccgttgccgcaagggttgccgccgcgtgtgttcgccttcgcc
atcttgaatatctcgccggacgtcttgcgcgtgctggccacgcaagcgcgcgtgggcacg
ttgcatttctatctgcccacgcccacgcaggggtactggggcgacctgcagacgttgagg
caacgccggcgcgaagacggcgcggtgcagttgtttgccgagcacgtgcaggagaacccg
ctgctgcaagcctggggcgcggccgggcgcgatttcatggcgctggtgggcgattacgaa
gtggtacacccattggccgaaattacggcctatgccgacccgctcgattccggccgtcgc
acgttggccgatggcgggctgggcgacagcctgctgcggcggatgcagagcgacctgttc
catcgccgcgcgccggcggtgcctgcgttgttgcctgcggtgaatctgcacgaccccagc
ctgcaggtgcacgcctgccacacccggctgcgcgagctgcaggtactgcacgaccaactg
cgcgcgctgctcgacgacccgcgcttcgacccgccgctgcagccgcgcgagattgcggtg
ctgtcgcccaacatcgacccgtacgtgccgtatctggacgcggtgttcggcagccatggc
aacgacgatgcgctgccctacgcgctggccgatgccagtccgttggccagcgagccgctg
gccgaagtgtttttgaccttgctcggcttgccgatcgcgcgtttcggtctgcatgaaatc
ctcgacctgctggccagtgcgccgatcgccgccgccgccgggctggacgaggccgggctg
gaacgcctgcgcagctggctgcacgcggcgggcgcgcgctgggggctggatgccgcgcat
cggcggcagcatcaggcaccgggcgacgatgcctacacctggcgctttgcgctggaccgg
ctgctgcttggccatgccagcggcgccgacgacgacatcgatggcgtggcgccgtggccg
caactggaaggcagcgcgttggccgcgctcgataccttgttgcggctgctgcgggtgctc
gaacgccatcaggcggtgctggccgacgcgatgacgccggtggagtggcgcgagcggttg
ctgggactgttggaagcattgattccgaccacgcccaccgcgccgcgtgcgcagcgcgcg
ctggatcgcttgcgcacgatgatcgaccagttcgcccgcgatgcagtgcgcgccgactac
gccggcaaggtgccggccgaggtggtgcgtgcgcatttcgctgcggtattgggcgagtcg
gacacgcgcgcgccgctgctcaccggcggcatcagtttcggccgcatggtgccgatgcgc
ttgctgccgttccgcgtgatctgcctgcttggtatgaacgatggcgatttcccgcgccgc
gacccggccgccgggctcaatcgcctgaccgctgaactgggtaccgaccgtcgccggcat
ggcgaccgttccacgcgcgaggacgaccgcttcctgttcctgcagttgttcgcctccgcg
caagaggtgttttacctcagctatctcggtgccgatgcgcgcgatggcagcgtgcgcgaa
ccgtcggtgctggtcagcgagttgctgtcaagcgccgcgcactaccacgccgccagcaat
gcgctcgacacgctggtggtgcggcatccgttgcagccgttcgccgccgccgcattcggt
gcgctgggcgatgagagcgatgccggtgccgacccgcgccgtttcagttatcgccggcaa
tggcgcccggcggtggacagcctggtcggtcagcggcagccgctggcgccgtgggtggcc
ggtgcattgccggccgacgacactgcgttgcaggccagcgtgtccatcgacgaactgcgc
cggctgtttgccgacccggccgggcagtttctgcgccatcgcctgggcatgcgcctgccc
gatccgggcggcgaagacagcgatctggaaccgttgctcgcacccacgcgcgggctggac
caatacggcttgcagcagcaggtcttcgaagccgcattggccggcgacaccgaaggcctg
tacgagcgcctgcgcgcgcgcgcgctgctgccatccggcccgctggggcggcgccagctc
gacgagcgcgtggcgcaattgcgcccgtatgccgatgcgtttcggcagtggcgtggccag
tcgccggccgagtcacgccggctgcaggtgcagatcggcgatatcgaacttcacgctcgt
gtgccgggctggtatgcaagcggcgtcgggcgcgtgcaggtcggcgccctcagcggccgc
agcgccattcgccatgggctggaatggttgttgctgcgcgccgccggcgaacacgcgccg
tacgtgcgtttcttcgaacacgaagacggcctgggcccgcatccgatcgatgtgcagccg
ctgtcgcagccgcaggcccagaccgcattggccgagctgctgcagctgtatcgccatggc
ttgcaaacgccgctggcgttcgcgccttacagcagttggaagtaccaccaggctgcgcgc
ggcgacgatctggacaaggccatcaaggacgcggccgggcagtggcaatcgggcttcggc
tggagcgaatcgcacagcccggaactgcgcttggtcaaccgcggccgcgacccgtttgcc
gatgcgcaacgcttcgccgatttcgccactaccagccatcgtgtgtacgcattgctcgaa
caaggcgatagcggcgcgccgctcgatgccgagcgcttgatcgacagctggcggcattgg
cacggcgcgcaggaagatgccgaatga
DBGET
integrated database retrieval system
