Xanthomonas oryzae pv. oryzae PXO99A: PXO_00892
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Entry
PXO_00892 CDS
T00763
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xop03032
]
PXO_00892 (ihfB)
03036 Chromosome and associated proteins [BR:
xop03036
]
PXO_00892 (ihfB)
03400 DNA repair and recombination proteins [BR:
xop03400
]
PXO_00892 (ihfB)
DNA replication proteins [BR:
xop03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PXO_00892 (ihfB)
Chromosome and associated proteins [BR:
xop03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PXO_00892 (ihfB)
DNA repair and recombination proteins [BR:
xop03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PXO_00892 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CDC48_2
PTS-HPr
HU-CCDC81_euk_2
VWA_3
Motif
Other DBs
NCBI-ProteinID:
ACD59036
UniProt:
B2SLH4
LinkDB
All DBs
Position
complement(2475073..2475384)
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AA seq
103 aa
AA seq
DB search
MTKSELIEILARRQAHLKSDDVDLAVKSLLEMMGQALSDGDRIEIRGFGSFSLHYRPPRL
GRNPKTGESVALPGKHVPHFKPGKELRERVSSVVPVDMSDTTD
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtccgaattgattgaaatcctggcgcgacgccaagcgcatctgaagtcggac
gacgtagatctggcagtcaagtcgctgctagaaatgatggggcaggcgctctccgatggt
gatcggatcgaaattcgcgggttcggcagtttttcgctgcattaccgtccgccacgtcta
gggcgtaatcccaagaccggcgaatcggtcgcattgccgggcaagcatgttccccacttc
aagccgggcaaggaattgcgtgagcgcgtcagctccgtggtgcctgtcgatatgtccgat
acgacggactga
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