Xanthomonas oryzae pv. oryzae PXO99A: PXO_01307
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Entry
PXO_01307 CDS
T00763
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXO_01307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xop03019
]
PXO_01307
03016 Transfer RNA biogenesis [BR:
xop03016
]
PXO_01307
Enzymes [BR:
xop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PXO_01307
Messenger RNA biogenesis [BR:
xop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PXO_01307
Transfer RNA biogenesis [BR:
xop03016
]
Prokaryotic type
tRNA degradation factors
PXO_01307
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
S1_2
KH_PNO1_2nd
DUF7680
Motif
Other DBs
NCBI-ProteinID:
ACD60073
UniProt:
B2SVJ9
LinkDB
All DBs
Position
complement(3589925..3592039)
Genome browser
AA seq
704 aa
AA seq
DB search
MAKITKTFQYGKHTVTLETGEIARQAGGAVIVKFDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYKNEVQIIATVMSMN
PDIDGDIAALIGASAALSLAGTPFNGPIAAAKVGYKNGEYILNPTVTDLKDSQLELVVAG
TANAVLMVESEAELLSEEVMLGAVTFGHREMQKVINIINELAVEAGTKPSDWVAPAKNDG
MIAALKEAVGDQLASAFQVRDKLQRRDAISAIKKDVLGALAPRATIEGWAAGDLAKEFGE
LEYQTMRGSVLSTKVRIDGRALDTVRPISAKAGVLPRTHGSALFTRGETQAIVITTLGTA
RDGQVIDAVSGEYKENFLFHYNFPPYSVGECGRFGAPKRREIGHGRLAKRGVLAVMPSLE
EFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGNDFVVLS
DILGDEDHLGDMDFKVAGTAEGVSALQMDIKIEGITEEIMKQALQQAKAGRLHILGEMAH
ALTTPRQELSDYAPRLLTIKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIIIAS
VNAIAAQAAKSRIEQITSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVGDKLKEGDLVRVKVLEVDKQGRIRLSIKAVEEGEGVPASAE
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaatcaccaaaaccttccagtacggcaagcacaccgtcacccttgagacgggc
gaaatcgctcgccaggcaggcggtgccgtcatcgtcaagttcgacgacaccgtactgctg
gtcaccgccgtcgccgccaagagcgcgcgcgaagggcaggacttctttcccctgacggtc
gattatcaggagaagttctacgccggcggccgcatcccgggcggcttcttcaagcgcgaa
ggacgtgcgaccgagaaggaaacgttgatctcgcgcctgatcgatcgtccgatccgtccg
ctgttcccggaggactacaagaacgaagtgcagatcatcgccacggtgatgtcgatgaac
cctgacatcgacggcgatatcgccgcgctgatcggcgcatcggccgcgctgtcgctggcc
ggcactccgttcaacggcccgatcgctgcggcgaaggtcggttacaagaatggcgaatac
atcctcaacccgaccgtgaccgatctgaaggattcgcagctggagttggtcgtggccggt
accgccaatgcggtgctgatggtcgagtccgaagccgagttgctgtcggaagaagtgatg
ctgggcgcggtgacgttcggccatcgcgaaatgcagaaagtcatcaacatcatcaacgag
ctggccgtcgaagccggcaccaagccgtccgattgggtggctccggcgaagaacgacggc
atgatcgccgcgctgaaggaagcagtgggcgaccagctcgcttcggctttccaggtgcgc
gacaagctgcagcgccgcgatgcgatttcggcgatcaagaaggacgtgctgggtgcgctg
gcgccgcgcgccacgatcgaaggctgggctgccggtgatctggccaaggaattcggcgag
ctggaataccagaccatgcgtggctcggtgctcagcaccaaggtgcgtatcgacggccgt
gcactggataccgtgcgtccgatcagcgccaaggccggcgtgctgccgcggacccatggc
tcggcgctgttcacccgcggcgagacgcaggcgatcgtgatcaccacgctcggcaccgca
cgcgacggtcaggtcatcgacgcagtctcgggcgagtacaaggaaaacttcctgttccat
tacaacttccctccgtactcggtaggcgagtgcggtcgtttcggtgcaccgaagcgtcgc
gaaatcggtcacggccgtctggccaagcgcggcgtgcttgccgtgatgccgagcctggaa
gaattcccgtacaccatccgcgtggtttcggaaattaccgagtccaacggttcgtcctcg
atggcatcggtgtgcggtagctcgctggcgctgatggacgccggtgtgccgatcaaggcg
ccggttgccggtatcgcgatgggcctggtcaaggaaggcaacgacttcgtcgtgctttcc
gacatcctgggcgacgaagatcacctgggcgacatggacttcaaggtggccggtactgcc
gaaggcgtgtccgcgctgcagatggacatcaagatcgaaggcatcaccgaagagatcatg
aagcaggcattgcagcaggccaaggctggtcgtctgcacattctgggcgagatggcgcat
gcactgaccacaccgcgtcaggaactgagcgactacgcgccgcgcctgctgaccatcaag
attcacccggacaagatccgtgaagtgatcggcaagggcggctcgaccatccaggcgatc
accaaggaaaccggtacgcagatcgacatccaggacgacggcacgatcatcattgcctcg
gtcaacgcgattgccgcgcaggctgcgaagtcacgcatcgagcagatcacctcggacgtg
gagccgggccgcatctatgaaggcaaggtcgccaagatcatggacttcggcgcgttcgtc
accatcctgccgggcaaggacggtctggtgcacgtctcgcagatttccagcgagcgcgtg
gagaaggtcggcgacaagttgaaggaaggcgatctggtccgcgtcaaagtgctggaagtg
gacaagcagggccgcatccgtctgtcgatcaaggcagtggaagaaggcgaaggcgttccg
gcttcggccgagtaa
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