Xanthomonas oryzae pv. oryzae PXO99A: PXO_01876
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Entry
PXO_01876 CDS
T00763
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop03030
DNA replication
xop03430
Mismatch repair
xop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PXO_01876 (holA)
03430 Mismatch repair
PXO_01876 (holA)
03440 Homologous recombination
PXO_01876 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xop03032
]
PXO_01876 (holA)
03400 DNA repair and recombination proteins [BR:
xop03400
]
PXO_01876 (holA)
Enzymes [BR:
xop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PXO_01876 (holA)
DNA replication proteins [BR:
xop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PXO_01876 (holA)
DNA repair and recombination proteins [BR:
xop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PXO_01876 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
ACD60181
UniProt:
A0A0K0GN77
LinkDB
All DBs
Position
complement(3696804..3697832)
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AA seq
342 aa
AA seq
DB search
MELRPEQLAGQSNQPLQPVYLIAGPETLRVLEAADAVRARARAEGIGEREVFDADGRDFD
WNQLDASFNAPSLFSPRRLVEVRLPSGKPGKDGAEVITRFCANPPPDVVLLITANDWSKA
HQGKWAEAVGRIGTIAVAWAIKPHELSDWIERRLRAHGLRADAAAVQRLSERVEGNLLAA
AQEIDKLALLADGKTLDLQAMESLVADAARYDVFRLAETTFSGQPAAVIRMLAGLRAEGE
AVAALMPILIKELLRTASLAKVQANGGNLAAEMKAQGLWESRQAPFKRALQRHPEPRRWE
RFVAEAGLVDRMAKGRADGDAWVGLERLLVAVAEARAVRLLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgccccgagcaactggccggccagtccaaccagccgttgcagccagtctat
ctgatcgccggcccggagaccttgcgtgtgcttgaggccgccgacgctgtgcgcgcgcgc
gcgcgcgctgaaggcatcggtgaacgcgaagtcttcgatgccgatggccgcgatttcgac
tggaatcagctcgacgccagcttcaacgcgcccagcctgttcagtccgcgccgcctggtc
gaggtgcgcctgcccagcggcaagcccggcaaggatggcgccgaggtcatcacccgcttc
tgcgccaacccgccgccggatgtggtgctgctgatcaccgccaacgactggagcaaggcg
catcagggcaagtgggccgaggccgtcggccgcatcggcacgattgccgttgcctgggcg
atcaagccgcatgaactctccgactggatcgagcgtcgcctgcgtgcgcacggcctgcgt
gccgacgccgccgcggtgcagcgcctgagcgagcgggtggaaggcaacctgcttgccgct
gcgcaggaaatcgacaagctcgctctgctggccgatggcaagacactggatctgcaggcg
atggagtcgttggtggccgatgccgcacgctacgacgtctttcggctggccgaaaccacg
ttttcggggcagccggccgcggtgatccgcatgcttgccggcctgcgcgccgaaggcgag
gcggtcgccgcgctgatgccgatcctcatcaaggaattacttcgcactgcgtcgctggcg
aaggtgcaggccaacggcggcaacctcgctgccgaaatgaaggcgcaggggctgtgggaa
tcgcgccaggcgccattcaagcgcgcgctgcaacgtcaccccgaaccgcgtcgctgggag
cgcttcgtcgccgaagccgggctggtcgatcgcatggccaaaggtcgcgccgacggcgac
gcctgggtgggtctggaacgcctgctggtggccgtggccgaagcccgcgcggtgagattg
ttggcgtga
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