Xanthomonas oryzae pv. oryzae PXO99A: PXO_04825
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Entry
PXO_04825 CDS
T00763
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PXO_04825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xop03019
]
PXO_04825
03009 Ribosome biogenesis [BR:
xop03009
]
PXO_04825
Enzymes [BR:
xop01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PXO_04825
Messenger RNA biogenesis [BR:
xop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PXO_04825
Ribosome biogenesis [BR:
xop03009
]
Prokaryotic type
rRNA helicases
PXO_04825
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
P-loop_SecA
adh_short
Motif
Other DBs
NCBI-ProteinID:
ACD58086
UniProt:
A0A0K0GIP1
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All DBs
Position
1446840..1448684
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AA seq
614 aa
AA seq
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MRAVANVGYESPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPVLSNADLNQVKPQA
LVLAPTRELAIQVAEAFQKYAEAIPGFRVLPVYGGQPYAQQLSALKRGVHVVVGTPGRVI
DHLDRGTLDLSQLKTLVLDEADEMLRMGFIDDVEAVLKKLPEKRQVALFSATMPPAIRRI
AQTYLKDPAEVIIAAKTTTSANIRQRYWWVSGLHKLDALTRILEVEPFDGMIIFARTKAG
TEELAQKLQARGLAAAAINGDMQQAAREKTIAQLKDGKLDILVATDVAARGLDVERISHV
LNYDIPYDTESYVHRIGRTGRAGRTGDAILFVTLREKGMLRSIERATRQPIEEMQLPSVD
AVNDTRVARFMTRITETLAGGQIDMYRDLLQRYEAENNVPAIDIAAAMAKLLQGDAPFLL
TPPVRGAREDAAPRERHQRADRGDRPRFEPKFERGPRADGERAPRPPRGDDAGGERPRRD
PVAPRGEPELGMESYRIEVGHSHGVKPANIVGAIANEAGLESRYIGRIDIQDDYSILDLP
ADMPRELLTHLKKVWVSGQQLNMRKLEEGEAAASPAKPRFPRGGKPSGRSNGPVRPMDRA
GAPHRKGPPKPRGE
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgttgccaatgtcggctacgagtcgccgtcgccgatccaggctgccaccatt
cccgcgttgctcgccggccgtgacgtcctcggccaggcccagaccggcaccggcaagacc
gccgcgttcgcgctgccggtgctgtccaacgccgatctcaaccaggtcaagccgcaggca
ttggtgctggccccgacccgcgaactggccatccaggtcgccgaggcgttccagaagtat
gccgaagccattccgggcttccgcgtgctgccggtgtacggcggccagccgtatgcccag
caactgagtgcgctcaagcgcggcgtgcatgtcgtggtcggtacccccggccgcgtgatc
gatcacctggaccgcggtacgctggatctgtcccagctcaagacgctggtgctggacgaa
gccgacgaaatgctgcgcatgggctttatcgacgacgtcgaagcggtactgaaaaagttg
ccggaaaagcgtcaggtggcattgttctcggccaccatgccgccggccatccgtcgcatc
gcgcagacctatctgaaggatccggccgaagtcatcatcgcggccaagaccaccacttcg
gccaacatccgccaacgctactggtgggtgagcgggctgcataagctggatgcgctgacc
cgcattctcgaggtcgagccgttcgacggcatgatcatcttcgcacgcaccaaggccggc
accgaagagctggcgcagaagctgcaggcgcgcggtctggccgcggccgccatcaatggc
gacatgcagcaggcggcgcgcgagaagaccattgcccagctcaaggacggcaagctggac
atcctggtcgccaccgacgtggccgcacgcggcctggacgtggagcgcatcagccacgtg
ctgaactacgacattccgtacgacaccgaaagctatgtgcatcgcatcggccgcaccggc
cgtgccggacgcacgggcgacgcgatcctgttcgtgacgctgcgcgaaaaggggatgctg
cgctcgatcgaacgcgccacccgtcagccgatcgaagagatgcagctgccgagcgtggat
gcggtcaacgacacgcgcgtggcgcgtttcatgacccgtatcaccgagaccctggccggc
ggccagatcgacatgtaccgcgatctgctgcagcgctatgaggccgaaaacaacgtgccg
gcgatcgatatcgccgccgcgatggccaagctgctgcagggcgatgcgccgttcctgctg
actccgccggtgcgtggcgcacgcgaagacgccgcgccgcgcgagcgtcatcagcgtgcc
gatcgtggcgaccgcccgcgcttcgagccgaagttcgagcgcggcccgcgggccgacggt
gagcgcgccccacgtccgccgcgtggcgacgatgccggcggcgagcgtccgcgtcgcgat
ccggtcgccccgcgtggcgagccggaattgggcatggagagctatcgcatcgaagtgggc
cacagccatggcgtgaagccggccaacatcgtcggcgcgatcgccaacgaagccgggctg
gaaagccgctatatcggccggatcgacattcaggacgattattcgatcctggatctgccg
gccgacatgccgcgcgaactgctcacccacctgaagaaagtctgggtgtccggtcagcag
ctcaacatgcgcaagctggaagagggcgaggcagccgcgtcgccggccaagccgcgcttc
ccgcgtggcggcaagccgtccggtcgttcgaacggcccggtccgtccgatggaccgcgct
ggcgcaccgcaccgcaagggcccgccgaagccgcgcggcgagtaa
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