Xanthomonas oryzae pv. oryzae PXO99A: PXO_05648
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Entry
PXO_05648 CDS
T00763
Name
(GenBank) DNA polymerase III, alpha subunit subfamily, putative
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xop
Xanthomonas oryzae pv. oryzae PXO99A
Pathway
xop03030
DNA replication
xop03430
Mismatch repair
xop03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PXO_05648
03430 Mismatch repair
PXO_05648
03440 Homologous recombination
PXO_05648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xop03032
]
PXO_05648
03400 DNA repair and recombination proteins [BR:
xop03400
]
PXO_05648
Enzymes [BR:
xop01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PXO_05648
DNA replication proteins [BR:
xop03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PXO_05648
DNA repair and recombination proteins [BR:
xop03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PXO_05648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
ACD59575
UniProt:
A0A0K0GLP4
LinkDB
All DBs
Position
3059805..3063395
Genome browser
AA seq
1196 aa
AA seq
DB search
MSTSRFVHLHVHTEFSLADSTIRVPEKPDQADPKKAKQANLLSRAVEIDMPALAVTDLNN
LFALVKFYKAAEGVGIKPIAGADVMIATPDMTPWRMTLLCRDREGYLSLSRLLTRAWMEG
HRPEGGVAIHPEWLQAGHANLFALAGRDSLAGRLFSEGRADLAEQQLADWQRVFGDGLHL
ELTRTGRECEERFNQFALNAAGVRGLPVVASNDVRFLYASDFNAHEARVCISSGRVLDDP
KRPRDYSDQQYLKSSEEMAALFADIPDAIDNTHALAQRCNIEMRLGTYFLPAYPVPDDET
LDSWIRSQSRDGLAARLEKSPIAPGKTRQDYVDRLEFELDTIINMGFPGYFLIVADFIQW
GKNQGIPIGPGRGSGAGSLVAWALQITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMDR
RDEVIDYVARKYGRERVSQIITYGTMAAKAVVRDAGRVLGFTYGLVDSVAKLIPNILGIT
LKDAMGEGKDSEMASPELIQRYQVEDDVRDLMDLARQLEDLTRNAGKHAGGVVIAPEPLS
EFCPLFAEHDEDGRGKNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINVRHARA
GIDPVDITTIPLDDVPTYKGVFALGNTGAVFQFESSGMRRLLKDARPDRFEDLIALVSLY
RPGPMDLIPDFNARKHGQQEIVYPDPRTEVILKDTYGIMVYQEQVMQMAQIVGDYSLGGA
DLLRRAMGKKVPAEMAKHREIFREGAAKGGVSAAKADEIFDLMEKFAGYGFNKSHAAAYA
LVSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEVRNLGLTVKPPRVNESAYMFEA
ASPDTIQYGLGAIKGVGQGACEAIVEERQRGGPYTTLLDFCTRVGTTKLNRRTLEAMINA
GAMDGLGKNRASLMLQLPEVMKATEQMARERASGQNSLFGGPDPSAPAMRLDLPESKEWP
LGQLLTSERETLGFYLSGHPFDPHREEVRELVGCDLGALEKILASQQRGAGGGGGDGEKR
AWRPEVSAILAGQVIGVRRKGDSQVFVQLEDGRGRVECSAFSDAMAEFGHLLTRDRILIV
KGGLREDEFNGGYSLRIRQCWDYEQICADHAQRLSLRLDLREKQAFKRIDALLAKHRPGK
TPLRLDLLLRAQSGGVAGMLDLNGSHSVRIDQQLMDSLRADPAVRTLKIKYSPPWA
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgtccacttcccgcttcgtccatctgcacgtccacaccgagttctcgctggcggattcc
actatccgtgtgcccgagaaaccggatcaggctgacccgaaaaaggccaagcaggccaac
ctgctgagccgggccgtcgaaatcgacatgcccgcgttggcggtcaccgacctcaacaac
ctgttcgcactggtcaagttctacaaggccgccgaaggcgtgggcatcaagccgatcgcc
ggcgccgacgtgatgatcgccacaccggacatgacgccctggcgcatgaccctgctgtgc
cgcgaccgggagggctacctgagcctgtcgcggctgctcacccgcgcctggatggaaggc
caccgcccggaaggcggcgtggcgatccatccggaatggctgcaggccggccacgccaac
ctgtttgcgctggccggccgcgacagcttggccgggcgtttgttcagcgaaggccgcgcc
gacctggccgagcaacaactggccgactggcagcgcgtgttcggcgacggcctgcacctg
gaactcacccgcaccggtcgcgagtgcgaagaacgcttcaaccagttcgcgctcaacgca
gcgggcgtacgcgggctgccggtcgtggccagtaatgacgtgcggtttttatatgcaagc
gacttcaacgcacacgaagcgcgcgtgtgcatttcctcgggccgcgtgctcgacgacccc
aagcgcccgcgcgactacagcgaccagcagtacctgaaatccagcgaggagatggcggca
ttgttcgccgacatccccgacgcgatcgacaacacccacgcgctggcgcaacgctgcaac
atcgagatgcgcctgggcacctacttcctgcccgcctacccggtgccggacgacgagacg
ctggacagctggatccgcagccaatcgcgcgacggtctggccgcacgtctggaaaaaagc
ccgattgcaccgggcaagacgcgccaggactacgtggaccggctcgaattcgagctggac
accatcatcaacatgggcttccctggctactttctgatcgtggccgacttcatccagtgg
ggcaagaaccagggcattccgatcggcccagggcgtggctccggtgccggctcgctggtg
gcctgggcgctgcagatcaccgatctggacccgctgccgtacaacctgctgttcgagcgc
ttcttgaaccccgagcgcgtgtcgatgcccgacttcgacatcgacttctgcatggaccgc
cgcgacgaagtcatcgactacgtggcacgcaagtacggccgcgagcgcgtcagccagatc
atcacctacggcaccatggccgccaaggcggtggtgcgcgatgccgggcgcgtactcggt
ttcacctatggtctggtcgacagcgtcgccaagctgatccccaacatcctgggcatcacg
ctcaaggatgcgatgggcgaaggcaaggattcggagatggcctcgccggaactgatccag
cgctaccaggtcgaagacgacgtgcgcgacctgatggacctggcgcgccagctcgaagac
ctcacccgcaacgccggcaagcacgccggcggcgtggtgatcgcgcccgagccgctgagc
gaattctgcccgctgttcgccgaacacgacgaagacggccgcggcaagaatccggtcacc
cagttcgacaaggacgacgtcgaagcggtgggcctggtgaagttcgacttcctcggcctg
cgcacgctgaccatcatcgattgggcggtcaaggcgatcaacgtgcgccacgcacgcgcc
ggcatcgacccggtcgacatcaccaccattccgctcgacgacgtgcccacctacaagggc
gtgttcgccttgggcaacaccggcgcggtgttccagttcgaatcctcgggcatgcgccgc
ctgctcaaggacgcgcgcccggaccgcttcgaagacctgatcgcgctggtgtcgctgtac
cgccccggcccgatggacctgatcccggacttcaacgcgcgcaagcatggccagcaggag
atcgtctatcccgacccgcgcaccgaagtcatcctgaaagacacctacggcatcatggtg
tatcaggagcaggtgatgcagatggcgcagatcgtcggcgattactcgctgggcggcgcc
gacctgttgcgtcgtgcaatgggcaagaaggtgccggccgaaatggccaagcaccgcgaa
atcttccgcgaaggtgcggccaagggcggcgtcagcgcggccaaggccgacgaaatcttc
gacttgatggagaagttcgccggctacggcttcaacaagtcgcacgcggccgcctatgcg
ctggtcagctatcagaccgcatggctgaaacggcattacccggccgaattcatggccgcg
acgctgtcctcggacatggacaacaccgacaaggtggtcggctttctcgatgaggtacgc
aacctcggcctcaccgtcaagccgccacgcgtcaacgaatcggcctacatgttcgaggcg
gccagcccggacaccattcaatacggcctgggcgcgatcaagggcgtcggccagggcgcg
tgcgaggcgatcgtcgaagaacgccagcgcggtggcccctacaccacgctgctggatttc
tgcacgcgcgtgggcaccaccaagctcaatcggcgcacgctggaagcgatgatcaatgcc
ggcgcgatggatgggctgggcaagaaccgcgcttcgctgatgctgcagttgcccgaagtg
atgaaggccaccgagcagatggcgcgcgaacgcgcctcggggcagaactcgctgttcggc
ggtccggacccgagcgcgccggcaatgcgcctggacctgcccgaaagcaaggaatggccg
ctgggccagctgctcaccagcgagcgcgaaacgctgggcttctacctcagcggccacccg
ttcgacccgcaccgcgaagaagtgcgcgagctggtcggctgcgacctgggcgcgctggaa
aagatcctcgcgtcgcaacaacgtggcgccggtgggggcggcggcgatggcgaaaaacgc
gcctggcgtcctgaagtgagcgccattcttgccggccaggtgatcggcgtgcgccgcaag
ggcgacagccaggtgttcgtgcaattggaagacggccgtggccgggtcgaatgcagcgcg
ttctccgatgcgatggccgagttcggccacctgctgacccgcgaccgcatcctgatcgtc
aagggcggcctgcgcgaggacgaattcaacggcggctacagcctgcgcatccgccagtgc
tgggactacgagcagatctgcgccgaccacgcgcagcgcctgtcgctgcgtctggatctg
cgcgaaaaacaggccttcaagcgcatcgacgcgctgctggccaagcaccgccccggcaag
actcccttgcgcctggacctgttgctacgtgcccagagcggtggcgtggccggcatgctc
gacctcaacggcagccactcggtgcgcatcgaccagcagctcatggacagcctgcgcgcc
gaccccgcggtgcggacgttgaagatcaagtacagcccaccgtgggcgtga
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