Xanthomonas oryzae pv. oryzicola BLS256: XOC_0149
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Entry
XOC_0149 CDS
T01873
Name
(GenBank) ATP-dependent RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
XOC_0149
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
MZB
ResIII
WHD_HRQ1
DUF6970
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AEQ94403
UniProt:
G7TIW0
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Position
complement(152682..155177)
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AA seq
831 aa
AA seq
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MPPFALAARTETAERALATTDGRPSRDGALLTERLERRYHDRITGSFTIPGRDGRYASIP
EDVPSALADALQARGISQLYSHQADAWAATQRGEHVAIVTPTASGKSLCYTLPVVSAAMT
SGAKALYLFPTKALAQDQVAELLELNRAGELGVKAFTFDGDTPGDARQAIRLHGDIVVSN
PDMLHQAILPHHTKWAQFFENLRYVVIDEIHTYRGVFGSHVTNVLRRLKRICAFYGATPQ
FILCSATIGNPQAHAQALIEEQVHAITESGAPTGDKHVLLWNPPVVNADLGLRASARSQS
NRIARIAIKSGLKTLVFAQTRLMVEVLTKYLKDIFDHDPRKPPRIRAYRGGYLPTERREV
ERAMRAGTIDGIVSTSALELGVDIGALDVVILNGYPGSVAATWQRFGRAGRRRQPALGVL
VASSQPLDQYVVRHPDFFADASPEHARTAPDQPLILFDHIRCAAFELPFIASEPFGPIDP
VVFLEALAESEVIHQEGDRWEWIADSYPANAVSLRSVADGNFVVVDKSDGKQQIIAEVDY
SAAALTLYEGAIHMVQSTPYQVERLDWEGRKAYVTRTHVDYYTDSIDYTKLKVLDRFDGG
VAGRGDSHHGEVHVVRRVSGYKKIRYYTHENIGYGPVNLPDQELHTTAVWWQLPQATLGK
AFASKQDALDGFLGAAYALHVVATVAVMADARDLQKAVGNGDGAWCAVADQTGRGQLRGV
EEGETATVELQQTFVPTVYLYDNFPGGVGLSEPLWLRQAELLQRADELVRRCDCSAGCPA
CVGPVLAAHEEGKGDSPKSLALTVLALLFDAQVPLRHATQVDDDLALDVPA
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgtttgccctcgctgcccgcaccgaaaccgccgaacgcgcgctggccaccacc
gacggccggccaagccgcgatggcgcgctgctcaccgagcgcctggaacggcgctaccac
gaccgcatcaccggcagcttcaccattcccgggcgcgacggccgctacgcgtcgattccc
gaggatgtgcccagcgcactggccgatgcgctgcaggcgcgcggcatcagccagctctac
agccatcaggccgatgcgtgggcggctacccagcgcggtgaacatgtggcgatcgtgacg
cccaccgcgtcgggcaaatcgctgtgctacacgctgccggtggtgagtgcagcaatgacc
agcggcgccaaggcgctgtacctgttcccgaccaaagcgctggcgcaggatcaggtggcc
gagttgctggagttgaaccgcgccggagaactgggcgtgaaagccttcaccttcgatggc
gacacgcccggcgatgcgcggcaggcgatccgcctgcatggcgatatcgtggtgagcaac
ccggacatgctgcatcaggcgatcctgccgcatcacaccaagtgggcgcagttcttcgag
aacctgcgctatgtggtgatcgacgagattcacacctatcgcggtgtcttcggcagccac
gttaccaacgtgctgcgccggctcaagcgcatctgcgcgttctatggcgccactccgcag
ttcattctgtgctcggccaccatcggcaacccgcaggcgcacgcgcaggccctgatcgaa
gaacaggtgcatgcgatcaccgaatccggcgcgcccactggcgacaagcatgtgctgttg
tggaacccgccggtggtcaatgcagatctgggcctgcgtgcgtcggcgcgttcgcagagc
aaccgcattgcgcgcatcgccatcaagagcggcctgaagacgctggtgttcgcgcagacg
cgcctgatggtggaagtgctgaccaagtatctgaaagacatcttcgaccacgacccgcgc
aagccgccccgcatccgtgcgtaccgcggcggctatctgcccaccgagcggcgcgaggtg
gagcgtgcgatgcgtgccggcacgatcgacggcatcgtttccacctcggcgctggaactg
ggcgtggatatcggtgcgctggacgtggtgatcctcaacggctaccccggcagcgtggcc
gccacatggcaacgctttggccgcgccgggcgccgccggcaaccggcattgggtgtgctg
gtagccagctcgcaacccttggaccaatacgtggtgcggcacccggacttcttcgccgat
gcctcgcccgaacatgcgcgcaccgcgccggatcaaccgctgattttgttcgatcacatc
cgctgcgccgcgttcgaattgccgttcattgccagcgaaccgttcgggccgatcgacccg
gtggtgttcctggaagcgctggccgaaagcgaagtgatccaccaggaaggcgatcgctgg
gaatggatcgccgacagctacccggccaatgcggtgagcctgcgctcggtggccgatggc
aacttcgtggtggtggacaagagcgacggcaagcagcagatcatcgccgaggtggattat
tcggccgctgcgctcaccttgtacgagggcgccatccacatggtgcagagcacgccgtac
caggtggagcggctggattgggaaggccgcaaggcctacgtgacgcgcacgcatgtggac
tactacaccgacagcatcgactacaccaagttgaaggtgctggaccgcttcgatggcggc
gtggccggccgtggcgactcgcatcatggcgaagtgcatgtggtgcggcgcgtgtccggc
tataaaaagattcgttactacacccatgaaaacatcggctacgggccggtgaatctgccg
gatcaggaactgcacaccaccgcggtgtggtggcagttgccgcaggcgaccttgggcaag
gccttcgcgtccaagcaggatgcgctggatggtttcctgggtgctgcgtatgcgctgcat
gtggtggccacggtggcagtgatggccgacgcgcgcgatctgcaaaaggccgtgggcaat
ggcgacggcgcgtggtgtgcggtggccgaccagaccgggcgcgggcaactgcgcggcgtg
gaagaaggcgagaccgccacggtggaattgcagcagaccttcgtgcccacggtgtatctg
tacgacaacttccccggtggcgtgggcttgagcgagccactgtggctgcgccaggccgag
ctgctgcaacgcgcggacgagttggtgcggcgttgcgattgcagcgccggttgcccggcc
tgcgtgggcccggtgctggccgcacacgaggaaggcaaaggcgactcgcccaagtcgttg
gcgctcacggtgctggcattgttgttcgatgcacaggtgccgttgcggcatgccacgcag
gtggacgacgacctcgctctggacgtgcctgcatga
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