Xanthomonas oryzae pv. oryzicola BLS256: XOC_0391
Help
Entry
XOC_0391 CDS
T01873
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03420
Nucleotide excision repair
xor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XOC_0391 (uvrD)
03430 Mismatch repair
XOC_0391 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_0391 (uvrD)
Enzymes [BR:
xor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XOC_0391 (uvrD)
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XOC_0391 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XOC_0391 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AEQ94628
UniProt:
G7TLK1
LinkDB
All DBs
Position
393840..396026
Genome browser
AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQAMELDETKYPPKQLSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
SGNVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPERIGKQLWTDSGDGGPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALISAQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARANALSLWEAAMLCTQQNTLAARARNALATFLSLVGQLHAETGEMELAE
RIDHLLMRSGLREHWAKESRGGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRDLLHEVRPKVQVSRTAS
LGAARGGPVHGVVEAAPITLGANVEHPKFGGGVVVDYEGAGAHARVQVQFDEVGAKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatctaaaccccgcccagcgcgaggccgtttccgcg
ccgccggggcattacctcgtgctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcatcgcctggctcaacgaagtccagggtgtgcccaatcacggcatcttcgcggtg
accttcaccaacaaggccgccggcgaaatgcgccaccgcaccgacctgcaactgcgcaat
ggcagccgcgggatgtggatcggcaccttccatggcttggcccatcggctgctgcgtctg
cattggcaggacgcgcggttgccagaaggtttccaggtcatggacagcgacgaccagttg
cggctggtcaagcgcgtggtgcaggcaatggagctggacgagaccaagtatccgcccaag
caactgagctggtggatcaacgagcagaaggacgaaggccgccgtccgcagcatatccag
cccgagcccaacgacgattggaccgaggtgcgccggcaggtgtatgcggcctaccaggaa
cgctgcgaccgctccgggttgctggatttcgccgaattgctgctgcgcgcgcacgagttg
ctgcgcgacacgcccgcgttgctggcgcattaccgcgcgcgcttccgcgagattctggtg
gacgagttccaggacaccaacgccatccagtacgccttcgtgcgcgtgctggccggtgaa
tcgggcaacgtgttcgtggtgggcgacgacgaccaggccatctatggctggcgcggcgcc
aaggtcgagaacgtgcagcgcttcctgaaggattttcccggcgcgcagaccgtgcggctg
gagcagaactaccgctccagcgccaatatcctgggcgcggccaatgcagtgatcgcgcac
aacccggagcggatcggcaaacagctgtggaccgattccggcgatggcggcccgatcgat
ctgtatgcggcctataacgaagtcgacgaggcgcgctacgtggtcgagcgcgcgcgccag
tgggtgcgcgacggcggcagttatggcgaagtagccgtgctctaccgcagcaacgcgcaa
tcgcgcgcgctggaagaagcgctgatctccgcgcagttgccgtaccgcgtatatggcggc
atgcgcttcttcgaacgcgccgaaatcaaggacgcattggcgtatctgcgcctgctcacc
aaccgcagcgacgatgcggccttcgagcgcgcggtgaatacgcctacgcgtggcatcggc
gatcgcacgttggatgaagtgcgccggttggcgcgcgccaatgcgttgtcgttgtgggaa
gcggcgatgctgtgcacgcagcagaacacgctggccgcacgcgcacgcaacgcgttggcg
accttcctcagcctggtcggtcagctgcacgccgaaaccggcgagatggaactggccgaa
cgtatcgaccacctgctgatgcgctcgggcctgcgcgagcattgggccaaggaaagccgt
ggcggactggattcggaatcgcgcaccgagaacctggacgaactggtctcggtcgcctcg
cgcttcacccgcccggacgatgaagacagccagggcatgacggagctggtcgccttcctc
gcttacgcatcgctggaagccggcgaaggccaggcgcaggccggcgaagaaggcgtgcag
ctgatgacgctgcattcggccaagggcctggagtttccgatcgtgtttttggttggcctg
gaagacggcttgttcccgagcgcgcgctcgttggaagagagtgggcggctggaagaagag
cgtcgcctggcgtacgtcggcatcacccgcgcgcggcagaagctggtgttgtgctacgcc
gaatcgcgccgcatccatggccaggacaactacaacgtgccgtcgcgctttctgcgcgaa
atcccgcgcgatctgctgcatgaagtacgcccgaaggtgcaggtctcgcgcaccgcctcg
ctgggcgcggcacgcggcgggccggtgcatggtgtggtggaagcggcaccgatcacgctc
ggcgccaacgtcgaacaccccaagttcggcggcggcgtggtcgtggactacgaaggcgct
ggcgcgcatgcgcgcgtgcaggtgcagttcgatgaagtcggcgccaagtggctggtgatg
gcttacgccaatctgacggttgtgtag
DBGET
integrated database retrieval system
