Xanthomonas oryzae pv. oryzicola BLS256: XOC_0605
Help
Entry
XOC_0605 CDS
T01873
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xor03021
]
XOC_0605 (rpoH)
Transcription machinery [BR:
xor03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XOC_0605 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
HTH_11
HTH_10
HTH_3
UCR_14kD
KORA
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AEQ94814
UniProt:
G7TBD4
LinkDB
All DBs
Position
604261..605109
Genome browser
AA seq
282 aa
AA seq
DB search
MANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQNLARRFRDELDLDAARELVHSHLRFVV
HVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEMHEFILKNWR
IVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMESRLSGRDIGF
DASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNHLQLLREGMAGLDTRSRDIVKR
RWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaacaatctcccgattcccagtgcgctcggttcgctggacgcctacatcggtgcc
gtgcaccagattccggtgctgtcggtcgatgaggagcagaatctggcccgccgcttccgc
gacgagctggatctggacgccgcgcgcgaactggtccattcccacctgcgcttcgtggtg
catgtggcccgcggctataacggctacggcctgccgctgggcgacctgatccaggaaggc
aatatcggcctgatgaaggcggtcaagcgcttcgacccggacatgggcgtgcgtttggtc
agcttcgcggtgcactggatccgtgccgaaatgcacgagttcatcctgaagaactggcgc
atcgtcaaggtcgccacgaccaaggcgcagcgcaagctgttcttcaacctgcgcaagtcc
aagacccgtctgggctggctcaatgcgtcggaagtgactgcggtcgccaaggacttgaac
gtctccgagcgtgaagtgatggagatggagtcgcgtctgtccggtcgcgacatcggtttc
gacgcatcgtccgacgaagacgacgatcacggcccgccgtcgccggtgagctacctggtc
gccaacgaagaagacccgtcgcaggcctacgagcgccacgacagcgaagacaaccacttg
cagttgctgcgcgaaggcatggccggtctggatacgcgttcgcgcgacatcgtcaagcgt
cgctggctggattcggattccaaggtgacgctgcaggagctggccgatgagtacggcgtg
tcggccgagcgtatccgccagatcgaggcgaatgcgctgaagaagatgaaggcgctgttc
gtcgcctga
DBGET
integrated database retrieval system
