Xanthomonas oryzae pv. oryzicola BLS256: XOC_0616
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Entry
XOC_0616 CDS
T01873
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XOC_0616 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xor03019
]
XOC_0616 (groL)
03110 Chaperones and folding catalysts [BR:
xor03110
]
XOC_0616 (groL)
03029 Mitochondrial biogenesis [BR:
xor03029
]
XOC_0616 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xor04147
]
XOC_0616 (groL)
Enzymes [BR:
xor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
XOC_0616 (groL)
Messenger RNA biogenesis [BR:
xor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
XOC_0616 (groL)
Chaperones and folding catalysts [BR:
xor03110
]
Heat shock proteins
HSP60 / Chaperonin
XOC_0616 (groL)
Mitochondrial biogenesis [BR:
xor03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
XOC_0616 (groL)
Exosome [BR:
xor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
XOC_0616 (groL)
Exosomal proteins of other body fluids (saliva and urine)
XOC_0616 (groL)
Exosomal proteins of breast cancer cells
XOC_0616 (groL)
Exosomal proteins of colorectal cancer cells
XOC_0616 (groL)
Exosomal proteins of bladder cancer cells
XOC_0616 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
AEQ94825
UniProt:
G7TBE5
LinkDB
All DBs
Position
609695..611335
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDIRFGEDARTRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASKTNDNAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DQAVKAAVVELKNISKPTTDDKAIAQVGTISANSDESIGNIIAEAMKKVGKEGVITVEEG
SGLENELDVVEGMQFDRGYLSPYFINNQQSQSADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLALEKATIKDLGRAKKVQVSKENTTIIDGAGDSAAIESRVGQIKTQIEDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RALVAVGELKGANEDQTHGIQIALRAMEAPLREIVANAGEEPSVILNKVKEGTGNYGYNA
ANGEFGDMVEFGILDPTKVTRSALQNAASIAGLMITTEAMVADAPKKDEPAMPAGGGMGG
MGGMDF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacattcgtttcggtgaagacgcacgtacccgcatggttcgtggcgtc
aacgtgcttgccaatgccgtgaaggccaccctgggcccgaagggccgcaacgtcgtgctc
gagaagagcttcggcgccccgaccatcaccaaggacggcgtctccgtcgccaaggaaatc
gaactggccgacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcttccaag
accaacgacaacgctggcgacggcaccaccaccgccaccgtgctggcgcaggccctgatc
cgcgaaggtgccaaggctgtggccgccggcatgaacccgatggatctgaagcgcggtatc
gaccaggccgtcaaggctgcggttgtcgagctgaagaacatctccaagcccaccaccgac
gacaaggcgattgcccaggtcggtaccatctcggccaactcggacgagtcgatcggcaac
atcattgccgaagcgatgaagaaggtcggcaaggaaggcgtgatcaccgttgaagaaggc
tcgggcctggaaaacgagctggacgtggtcgagggcatgcagttcgatcgcggctacctc
tccccgtacttcatcaacaaccagcagagccagtcggccgacctggacgacccgttcatc
ctgctgcacgacaagaagatctccaacgtgcgtgacctgctgcctgtgctggaaggcgtg
gccaaggccggcaagccgctgctgatcgtcgccgaagaagtcgaaggcgaggcgctggcg
accctggtggtcaacaccatccgcggcatcgtcaaggtcgtggccgtcaaggcaccgggc
ttcggcgaccgtcgcaaggcgatgctggaagacatggccgtgctgaccggcggcaccgtg
atctccgaggaagtgggcctggcgctggaaaaggcgaccatcaaggacctgggccgcgcc
aagaaagtgcaggtttccaaggaaaacaccacgatcatcgacggcgctggcgattcggcc
gcgatcgagtcgcgcgtcggccagatcaagacccagatcgaagacacctcgtccgattac
gaccgtgaaaagctgcaggaacgcgtggccaagctggccggcggcgttgcagtgatcaag
gtcggcgcctcgaccgaaatcgaaatgaaggaaaagaaggcacgcgtcgaagacgccctg
cacgcgacccgtgcagccgtcgaagaaggcgtggtcccgggcggcggcgtggccctggtg
cgtgcgctggtggccgtgggcgagctcaagggcgccaacgaagaccagacccacggcatc
cagatcgctttgcgcgccatggaagccccgctgcgcgaaatcgtcgccaatgccggcgaa
gagccgtccgtgatcctgaacaaggtcaaggaaggcaccggcaactatggctacaacgcg
gccaacggcgagttcggcgacatggtcgaattcggcatcctggacccgaccaaggtcacc
cgttcggcgctgcagaacgccgcctcgatcgccggcctgatgatcaccaccgaagccatg
gtggccgatgcaccgaagaaggacgagccggcaatgccggccggcggtggcatgggcggc
atgggcggcatggatttctga
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integrated database retrieval system
