KEGG   Xanthomonas oryzae pv. oryzicola BLS256: XOC_0811
Entry
XOC_0811          CDS       T01873                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
xor  Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00740  Riboflavin metabolism
xor01100  Metabolic pathways
xor01110  Biosynthesis of secondary metabolites
xor01240  Biosynthesis of cofactors
xor02024  Quorum sensing
Module
xor_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:xor00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    XOC_0811 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XOC_0811 (ribD)
Enzymes [BR:xor01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     XOC_0811 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     XOC_0811 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: AEQ95017
UniProt: G7TD71
LinkDB
Position
811044..812153
AA seq 369 aa
MSETAAIASADDHRWMAQALRLAERGAYTTRPNPMVGCVIVRDGVCVGEGFHQRAGGPHA
EVFALRAAGELARGATAYVTLEPCAHYGRTPPCALALIEAGVTRVVAAMADPFPQVNGGG
FALLRDAGIEVLSGVMHAQARTLNQGFLSRVERGRPWLRVKLGASLDGRTALASGQSKWI
TGADARADVQRWRARAGAILTGAGTVLADDPSMTVRLGDDTACVPPLRVVLDAGLRTLAC
KNIRNGDAPTLYLHGDAVAATALDGAAYAALPLHVGRFDLSAVLALLAERDINEVHVEAG
ATLSGALLQAGLVDELLVYMAPVLLGDTARPLLAGLGIETMAQRYELQLRDVRQLGQDLR
LHYAPSAVV
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtgagaccgcggcgatcgcgagtgccgatgaccaccgctggatggcgcaggcgttg
cgcttggccgagcgcggcgcctacaccacccgccccaatccgatggtgggctgcgtgatc
gtgcgcgatggcgtgtgcgtgggcgaaggctttcatcaacgtgcgggtggcccgcatgcc
gaagtcttcgcgttgcgtgcggccggtgagttggcgcgcggtgccactgcgtatgtgacc
ctggagccatgcgcgcattacgggcgcacgccgccgtgtgcgttggcgttgatcgaggca
ggcgtaacgcgtgtggtcgcggcgatggccgatccgtttccgcaggtcaatggcggtggt
ttcgcgttgctgcgcgacgctggaatcgaggtgctcagcggggtgatgcacgcgcaggcg
cgcacgctcaatcagggctttctgtcgcgggtggagcgtggccggccgtggctgcgggtc
aaactgggcgccagccttgacgggcggaccgcgttggccagcggccaatccaaatggatc
accggagccgacgcgcgtgcggacgtgcagcgttggcgtgcgcgtgccggcgcaattctc
actggtgctggcacggtgttggccgacgatccgtcgatgacggtgcggctgggcgatgac
accgcgtgcgtgccaccgctgcgtgtggtgctggatgccggcttacgcacgttggcgtgc
aagaacatccgcaatggcgatgcgccgacgctgtatctgcatggcgatgctgtcgctgca
accgcgctggatggtgcggcatatgcggcactgccgttgcacgtgggccgtttcgatctg
tccgcagtgctggcgttgctggccgagcgcgacatcaatgaagtgcatgttgaagccggc
gccacgctgagcggtgcgctgttgcaggccgggctggtggacgaactgctggtctacatg
gcgccggtgttgctgggcgacaccgcaaggcccttgctcgctggccttggcatcgaaacg
atggcccagcgctacgaattgcaactacgcgatgtacgtcagctcgggcaggatctgcgt
ttgcattacgcgccatcggcggtggtatga

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