Xanthomonas oryzae pv. oryzicola BLS256: XOC_1159
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Entry
XOC_1159 CDS
T01873
Name
(GenBank) DNA polymerase III subunit gamma-tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03030
DNA replication
xor03430
Mismatch repair
xor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XOC_1159
03430 Mismatch repair
XOC_1159
03440 Homologous recombination
XOC_1159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xor03032
]
XOC_1159
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_1159
Enzymes [BR:
xor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XOC_1159
DNA replication proteins [BR:
xor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XOC_1159
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XOC_1159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
RuvB_N
AAA_16
AAA_22
AAA_14
AAA_5
ResIII
AAA_18
AAA_7
PIF1
Mg_chelatase
nSTAND3
AAA_19
TsaE
AAA_24
AAA_2
SKI
Motif
Other DBs
NCBI-ProteinID:
AEQ95347
UniProt:
G7TFZ2
LinkDB
All DBs
Position
1130835..1132931
Genome browser
AA seq
698 aa
AA seq
DB search
MSYLVLARKWRPKRFAELVGQEHVVRALSNALDSGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCETGTSADPCGQCPACLDIDAGRYIDLLEIDAASNTGVDDVREVIENAQYMPSRGKF
KVYLIDEVHMLSKAAFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
DQIQGQMTRILAAEQIESDPSAIVQLSKAADGSLRDGLSLLDQAIAYAGGALREDVVRTM
LGTVDRTQVGAMLQSLADGDGARLMQVVAALAEFSPDWSGVLEALAEALHRVQVQQLVPS
VAFVGDGIDPTPFAAQLRPEVVQLWYQMALNGRRDLYLAPSPRAGFEMAVLRMLAFRPAA
AVPAGGSDDGRGTTAGGGARSAAAGGQAAAPALAAPVTAAPPMVAATAAVTDTMPVAAAE
ASLPASATQATPTPAAAPAPAPVVMLPPQESSSPSRASAASARIDDTPPWAVDDAPVRTQ
ATTASDTMAVLAPEAAMASPSSAPVELAQPVAIASDAAEDAPASVATSSPAALVEPSSFE
EPAVVTPPATAVSAADSAADASALLDDGRIADAEQWLELVTRSGLNGPSRQLAANAAFIG
HRDGVLRLALAPGFEYLHSERSIANLAQALAPVLGNTPRIVIETGSADVETLHERASRQK
GERQSAAETAFMNDPTVQLLIQQQGARIVPDSIRPYDE
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatctcgttctcgcccgcaagtggcgcccgaagcgttttgccgaactcgtaggc
caggaacacgtggtccgcgcgctcagtaacgcgctcgacagtgggcgcgtgcatcacgcg
ttcctgttcaccggcacccgcggcgtgggcaagaccaccattgcgcgcatcttcgccaag
tcgctcaactgcgagaccggtacaagtgccgacccatgcggccagtgcccggcctgtctg
gacatcgacgccggtcgttacatcgacctgctggaaatcgatgccgcgtccaacaccggc
gtggacgatgtgcgcgaggtgatcgagaacgcgcagtacatgccctcgcgcggcaagttc
aaggtttacctgatcgacgaagtgcacatgctgtccaaggcggcgttcaatgcgttgctc
aagacgctggaagagccgccggagcacgtgaagttcctgctggctaccaccgacccgcag
aaattgccggtgacggtgctgtcgcgctgcctgcagttcaacctcaagcggctggacgag
gaccagattcagggccagatgacccgcatcctggcagccgagcagatcgaatcggatccg
tcggcgattgtgcagctgtccaaggcagccgacggctcgttgcgcgatggcctgtcgctg
ctggatcaggccatcgcctatgccggcggcgcgctgcgcgaggacgtggtgcgcaccatg
ttgggcacggtcgatcgcacccaggtcggcgcgatgctgcaatcgctggccgatggcgat
ggcgcgcgcctgatgcaggtagtggccgcgctggctgagttttcgcccgattggagcggg
gtgctggaggctctggccgaggcgttgcatcgcgtgcaggtgcagcagctggtgccgtcg
gtggcctttgttggcgacggcatcgacccgactccttttgcggcgcagttgcggccggaa
gtggtgcagctgtggtaccagatggcgctcaacgggcgtcgtgatctgtatctggcgccc
agtccgcgcgctggcttcgagatggcagtgctgcgcatgctcgccttccgccccgctgcg
gcggtgccggctggcggctcggacgacggacgcggcaccacggcgggcggtggtgcgcgt
tctgccgctgccggcggtcaggctgctgcgccggcactggcagcaccggtgacagctgcg
ccccccatggtggccgcgactgctgcggtgacggatacgatgcctgtggcggctgcggag
gcgtccctgccggcatcagcgacccaggcaactccgacgccggccgcagctccggcgccg
gctcccgttgtcatgcttcctccccaagaatcttcttcgcccagtcgcgcgtctgcagcc
agcgcgcgcattgacgacacgccgccgtgggcagtggacgatgcgccggtgcgcacgcag
gccacaactgcgtccgacacgatggccgtgcttgcgcctgaagccgcgatggcttcgccg
tcgtccgcacccgtcgagctcgcacaacccgttgcgatcgcgtccgacgccgcagaggac
gctccggcgtcggttgcaacatcttcgccggccgcgcttgtcgagccctcatcgtttgaa
gagccggcagtggtcacgccaccagcaacggcagtatccgcagcagactcagcagccgat
gcatcggctttgctcgacgacggccgcatcgccgatgccgagcaatggctggagctggtc
acgcgcagtggcttgaatggaccgtcgcggcagctggccgccaacgccgcgtttatcggt
catcgcgatggcgtgctgcggctggcgctggcgccgggttttgaatatctccattccgag
cgctccatcgccaacctcgcgcaggcgttggcaccggtgttgggaaacacgccgcgcatc
gtcatcgaaaccggtagcgccgatgtcgaaaccttgcacgagcgtgccagccgccagaaa
ggcgagcgccagagcgcggccgaaacagcctttatgaacgacccgacggtgcagctgctg
atccagcagcaaggcgcgcggatcgtccccgattccatccgcccttacgacgagtaa
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