Xanthomonas oryzae pv. oryzicola BLS256: XOC_1668
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Entry
XOC_1668 CDS
T01873
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03030
DNA replication
xor03430
Mismatch repair
xor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
XOC_1668 (holA)
03430 Mismatch repair
XOC_1668 (holA)
03440 Homologous recombination
XOC_1668 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xor03032
]
XOC_1668 (holA)
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_1668 (holA)
Enzymes [BR:
xor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XOC_1668 (holA)
DNA replication proteins [BR:
xor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
XOC_1668 (holA)
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
XOC_1668 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AEQ95837
UniProt:
G7TKY1
LinkDB
All DBs
Position
1645006..1646034
Genome browser
AA seq
342 aa
AA seq
DB search
MELRPEQLAGQSNQPLQPVYLIAGPETLRVLEAADAVRARARAEGIGEREVFDADGRDFD
WNQLDASFNAPSLFSPRRLVEVRLPSGKPGKDGAEVITRFCANPPPDVVLLITANDWSKA
HQGKWAEAVGRIGTIAVAWAIKPHELSDWIERRLRAHGLRAAAAAVQRLSERVEGNLLAA
AQEIDKLALLADGKTLDLQAMESLVADAARYDVFRLAETTFSGQPAAVIRMLAGLRAEGE
AVAALMPILIKELLRTASLAKVQANGGNLAAEMKAQGLWESRQAPFKRALQRHPEPRRWE
RFVAEAGLVDRMAKGRADGDAWVGLERLLVAVAEARAVRLLA
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggaacttcgccccgagcaactggccggccagtccaaccagccgttgcagcctgtctat
ctgatcgccggccccgagaccttgcgtgtgcttgaggccgccgacgcggtgcgcgcgcgc
gcgcgcgctgaaggcatcggtgaacgcgaagtcttcgatgccgatggccgcgatttcgac
tggaatcagctcgacgccagcttcaacgcgcccagcctgttcagtccgcgccgcctggtc
gaggtgcgcctgcccagcggcaagcccggcaaggatggcgccgaggtcatcacccgcttc
tgcgccaacccgccgccggacgtggtgctgctgatcaccgccaacgactggagcaaggcg
catcagggcaagtgggccgaggccgtcggccgcatcggcacgattgccgttgcctgggcg
atcaagccgcatgaactctccgactggatcgagcgtcgcctgcgtgcgcacggcctgcgc
gccgccgccgccgcggtgcagcgcctgagcgagcgggtggaaggcaacctgcttgccgct
gcgcaggaaatcgacaagctcgctctgctggccgatggcaagacgctggatctgcaggcg
atggagtcgttggtggccgatgccgcacgctacgacgtctttcggctggccgaaaccacg
ttttcggggcagccggccgcggtgatccgcatgcttgccggcctgcgcgccgaaggcgag
gcggtcgccgcgctgatgccgatcctgatcaaggaattacttcgcactgcgtcgctggcg
aaggtgcaggccaacggcggcaacctcgctgccgaaatgaaggcgcaggggctgtgggaa
tcgcgccaggcgccattcaagcgcgcgctgcaacgtcaccccgaaccgcgtcgctgggag
cgcttcgtcgccgaagccgggctggtcgatcgcatggccaaaggtcgcgccgacggcgac
gcctgggtgggtctggaacgcctgctggtggccgtggccgaagcccgcgcggtgagattg
ttggcgtga
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