Xanthomonas oryzae pv. oryzicola BLS256: XOC_1844
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Entry
XOC_1844 CDS
T01873
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
xor03036
]
XOC_1844 (smc)
Chromosome and associated proteins [BR:
xor03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
XOC_1844 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_23
AAA_15
SMC_hinge
AAA_29
YscO
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AEQ96005
UniProt:
G7TAP3
LinkDB
All DBs
Position
1817924..1821427
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AA seq
1167 aa
AA seq
DB search
MRLSTIKLSGFKSFVDPTTLHLPTNMTGIVGPNGCGKSNIIDAVRWVMGESSASRLRGDS
LTDVIFSGSSARKPVSQATVELIFDNSDHTITGEFASFNEISVKRLVSRDGNSAYYLNGT
KCRRRDITDLFLGTGLGPRSYSIIEQGMISQIIEARPEDLRVYLEEAAGISKYKERRKET
ETRIRHTRENLDRLGDLREEITKQLAHLQRQARQAEQYQALQEERRIKDAEWKALEYRGL
DGQLQGLREKLNQEETRLQQFIAEQRDAEARIETSRVRREEAAEAVAKAQADVYQVGGAL
ARIEQQIQHQRELSHRLHKARDEAQSQLQELTQHISGDSAKLSVLREAVAAAEPQLEQLR
EDHEFRQESLREAEARLADWQQRWETHNRDTGEASRAGEVERTRVDYLDRQALEADRRRE
ALVNERAGLDLDALAEAFEQIELRHETQKTSLDGLTEQVEARKHALGGLQEQQRASQGEL
AEVRKQAQAARGRLSSLETLQQAALGQEQGAAVAWLTSCGLDSAARVGERISVQSGWENA
VEGALGQLIEGVLVDAPEQLVDALGELGDGRIALVSSATDNANFAPTSLAAKVQGPIAIR
RLLARLHTAEDLDAARTLQRSLPEGDSVITRNGERLGEGWVRVSRSGAAKQGALLRERQI
QELRTQIETLQEREAELEHQLASFREQLLAAEQQREDAQRQLYMAHRSVSELAGQLQSQQ
GKVDAARTRIERIETELSQLLETLDTSREQAREARAKLEDAVTLMGDLQGTREALESERR
QLTDARDQARDAARGVRDAMHALALTLESQRTQIASLSQTLERMDSQRGQLDTRLEDLVA
QLSEGDSPVETLEHEHQAALSERVRTERALGEARTLLDSIDSELRSFEQTRQQRDEQALA
QRERISQRKLDQQALVLSAEQLSAAVVKAGFVLEDVVNGLPESANPADWEATVGQIDGRM
RRLEPVNLAAIQEYGEAAQRSEYLDAQNLDLNTALETLEEAIRKIDRETRGRFKDTFDRV
NSGVQALYPRLFGGGHAYLELTGEDLLDTGVTIMARPPGKRVSSISLLSGGEKAMTAVAL
VFAIFQLNPAPFCLLDEVDAPLDEANVGRLANMVREMSEKVQFLFVSHNKATMEAARQLS
GVTMREPGVSRLVSVDLEEAARLAGAA
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgtccacgatcaagctgtccggtttcaagtcgttcgtcgacccgaccacgttg
catctgcccaccaatatgaccggcatcgtcggccccaatgggtgcggcaagtccaacatc
atcgacgcggtgcgctgggtgatgggcgaaagctcggccagccgcctgcgcggcgactcg
ctgaccgacgtgatcttctccggctcctcggcgcgcaagccggtgtcgcaggcgacggtg
gagctgatcttcgacaactccgatcacaccatcactggcgagttcgcctcgttcaacgag
atatcggtcaagcgcctggtcagccgcgacggcaacagcgcctattaccttaacggcacc
aagtgccggcgccgcgacatcaccgatctgttcctgggtaccggccttgggccgcgcagc
tactcgatcatcgagcagggcatgatcagccagatcatcgaagcgcgcccggaagacctg
cgcgtgtatctggaagaagccgccggcatttccaagtacaaggaacgtcgcaaggaaacc
gaaacacgcattcggcatacgcgcgaaaatctcgaccgcctgggcgacctgcgcgaggaa
atcaccaagcagctggcgcatctgcagcgccaggcgcggcaggccgagcagtaccaggcg
ttgcaggaagagcgccggatcaaggatgccgagtggaaggcgctggaataccgcggcctg
gatggacagctgcagggcctgcgcgaaaagttgaatcaggaagagacccgcctgcagcaa
ttcatcgccgaacaacgcgatgccgaagcgcgtatcgaaaccagccgcgtgcgccgcgaa
gaagctgccgaagcggtagccaaggcgcaggccgatgtctaccaggtcggtggtgcattg
gcgcgcatcgagcagcagatccagcatcagcgcgagctctcgcatcgtttgcacaaggcg
cgcgatgaggcgcagagccagctgcaggaattgacccagcacatcagtggcgactcggcc
aagttgagtgtgctgcgcgaagcggtggccgctgccgagccgcaactggaacaactgcgc
gaagaccacgaattccgccaggagtcgctgcgtgaggccgaagcgcggctggccgactgg
cagcagcgctgggaaacccataaccgcgacaccggcgaagcctcgcgtgccggcgaagtg
gagcgcacgcgcgtcgattatctggaccgccaggcgctggaagccgatcgtcgtcgcgaa
gcgctggtcaacgagcgcgccggcttggatctggacgcattggccgaggcgttcgagcag
atcgaactgcgccatgaaacccagaagacctcgctggacggtttgaccgagcaggtcgaa
gcgcgcaagcacgcgctcggcgggctgcaggaacagcaacgggcaagccagggcgagctg
gccgaagtgcgcaagcaggcgcaggctgcgcgcggtcggctgtcgtcgctggaaaccttg
cagcaggctgcgcttggtcaggagcaaggcgcggcagtggcgtggctcacgtcgtgcgga
ctggattcggcagcgcgcgtgggcgagcgcatcagcgtccagagcggctgggaaaatgca
gtcgaaggcgcgctggggcagttgatcgaaggcgtgctggtggatgcgccggagcaactg
gtcgacgcgttgggcgagttgggcgatggccgcatcgcgctggtgtccagcgcaaccgac
aacgcgaacttcgcgccgacctcgttggccgccaaggtgcaggggccgattgcgatccgt
cgcctgctcgcacgtctgcacaccgccgaggacctggacgcggcgcgtacgctgcaacgc
agcctgcctgaaggcgactcggtcatcacccgcaatggcgagcggctgggcgagggctgg
gtgcgcgtctcgcgctcgggcgcggccaagcagggcgcgctgctgcgcgagcgccagatc
caggagctacgcacccagatcgaaaccttgcaggaacgcgaagccgagctcgagcaccag
ctcgccagcttccgcgaacaactgcttgcggccgagcagcagcgcgaagacgcgcagcgc
cagctgtacatggcgcaccgcagcgtttccgaactggccgggcagttgcagagtcagcaa
ggcaaggtggatgcggcgcgcacgcgcatcgagcgcatcgaaaccgagctgtcacagctg
ctggaaaccttggacaccagccgcgaacaggcacgcgaggcgcgcgccaagctcgaagat
gcggtcaccttgatgggcgatctgcagggcacgcgcgaagcgctggaaagcgagcgtcgt
cagctcaccgatgcgcgcgatcaagcgcgcgatgccgcacgcggcgtgcgcgatgcgatg
catgccttggcgttgacgctggaatcgcagcgcacccagattgcctcgctgagtcagacg
ctggagcgcatggatagccagcgtggccagctcgacacgcgactggaagatctggtggcc
cagctcagtgaaggcgattcgccggtggaaacgctggagcacgaacatcaggccgccttg
agcgagcgcgtgcgcaccgagcgcgcgctgggcgaagcgcgcaccctgctcgacagcatc
gacagcgagctgcgcagcttcgaacagacccgccagcagcgcgacgaacaggcgctggcg
cagcgcgaacgcatttcgcaacgcaagctcgatcagcaggccttggtgctcagcgccgag
cagttgtcggccgcagtggtgaaagcaggcttcgtgctcgaagatgtggtcaatggcttg
cccgagtcggccaatcctgccgactgggaggcgaccgtcggccagatcgacggccgcatg
cggcgcctggagccggtgaacctggctgccatccaggaatacggcgaggctgcgcagcgt
tcggaatatctggacgcgcagaacctggacctcaataccgcgctggaaacgctggaagaa
gccatccgcaagatcgaccgcgaaacccgcggccgtttcaaggacaccttcgaccgcgtc
aactccggcgtgcaggcgttgtacccgcgcctgttcggcggcgggcatgcgtatctggaa
ctcaccggcgaagacctgctcgacaccggcgtcacgatcatggcgcgcccgccgggcaag
cgcgtgtccagcatttcgctgctctccggcggcgagaaggcgatgacggcggtggcgctg
gtgtttgcgatcttccagctcaaccccgcgccattctgcttgctcgacgaagtggacgca
ccgctggacgaagccaatgtcggccgcctggccaacatggtgcgcgagatgagcgagaag
gtgcagttcctgttcgtcagccataacaaggcgaccatggaagcggcgcgccagttgtcc
ggcgtgaccatgcgcgagccgggcgtcagccggctggtcagcgtggacctggaagaggcc
gcacgtttggcgggtgcggcatga
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integrated database retrieval system
