Xanthomonas oryzae pv. oryzicola BLS256: XOC_2032
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Entry
XOC_2032 CDS
T01873
Symbol
miaB
Name
(GenBank) tRNA-I(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xor03016
]
XOC_2032 (miaB)
Enzymes [BR:
xor01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
XOC_2032 (miaB)
Transfer RNA biogenesis [BR:
xor03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
XOC_2032 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
GST_C_2
Motif
Other DBs
NCBI-ProteinID:
AEQ96180
UniProt:
G7TCK2
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Position
complement(2039974..2041770)
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AA seq
598 aa
AA seq
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MDLALKREVPPRSLSPYASPDTVLQVVDAQLAKGDDLLGKRCSAADVLWGGVLRWMAEFG
LIDPPPPHPRLHRPDGCTPGGGAGPGGQHLRWGGRCWRKRVNCVAVFYPPGISAMPGTSV
SDLSTATAVDAPALLPLPVARPCAPAVVRGKLYIKTHGCQMNEYDSAKMADVLAASEGLE
LTDDPEEADVVLVNTCSIREKAQEKVFSQLGRWKALKAGGRPVIIGVGGCVASQEGEAIV
KRAPHVDLVFGPQTLHRLPELIRARRESGKSQVDISFPEIEKFDRLPEPRAEGPSAFVSI
MEGCSKYCSFCVVPYTRGEEVSRPFEDVLVEVAQLAAQGVREINLLGQNVNAYRGAYGAD
AGDAAQYADLGLLIRTIAQIEGIGRIRFTTSHPLEFSDSLVDAYRDVPQLANYLHLPVQA
GSDRILSAMKRGYTALEFKSRIRKLRAVRPDISISSDFIVGFPGETEADFEKTMKLIEDV
GFDQSFSFVYSRRPGTPASDLQDDTPETVKQARLARLQAHISAHAASISQSMVGSVQRVL
VEGPSRRDPNELTGRSENMRPVNFPGNPRLIGQFVDVLITEAMSNSLRGRIQLDDSAH
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggaccttgcgctcaagcgtgaggtcccaccacgctcgctctcgccctacgccagcccc
gacaccgtgctgcaggtggtcgatgcgcagctggcaaagggcgatgacttgctcggcaag
cgctgcagcgcagccgatgtgctgtggggcggcgtcctgaggtggatggcggaattcggc
ctgatcgacccgccgcccccccacccgcgcctccaccgcccggatggctgcacgcccggc
ggtggcgcgggcccaggcggtcaacacctccgctggggcggacgctgctggcgcaagcgg
gtaaactgcgtggctgtcttctacccgcctggaataagcgccatgcccgggacatccgtt
tccgacctgtccacggccaccgccgtggatgcacctgccctgctgcccttgcccgtggcg
cgcccttgcgcgcctgccgtggtgcgcggcaagctctatatcaagacccacgggtgccag
atgaacgagtacgactcggcaaagatggccgacgtgctcgccgcctccgaaggcctggag
ctgaccgatgacccggaagaagcggatgtggtgctggtcaacacctgctccattcgcgaa
aaggcgcaggaaaaggtcttcagccagttggggcgctggaaggcgctgaaggccggcggc
aggccggtgatcatcggcgtcggcggctgtgtggcgtcgcaggaaggcgaagccatcgtc
aaacgtgcgccccatgtagacctggtgttcggcccgcagacgctgcaccgcttgccggaa
ctgatccgcgcacggcgcgaatcgggcaagtcgcaggtggacatcagcttcccggagatc
gagaagttcgaccgcctgcccgagccgcgtgccgaaggcccgtcggcgttcgtctcgatc
atggaaggctgctccaaatactgctcgttctgcgtggtgccttacacccgtggcgaagaa
gtcagccggccgttcgaagacgtgctggtggaagtggcgcaattggcggcgcaaggcgtg
cgcgagatcaacctgctcggccagaacgtcaacgcgtaccgcggtgcatatggcgccgat
gccggcgacgccgcgcagtacgccgatctgggcctgctgatccgcaccatcgcgcagatc
gagggcatcggccgcatccgcttcaccacctcgcatccgctggagttttccgattcgctg
gtggatgcctaccgcgatgtgccgcagctggccaactacctgcacctgccggtgcaggcg
ggcagcgaccgcattctgtcggcgatgaagcgcggctacaccgcgctggaattcaaatcc
aggatccgcaagctgcgtgcggtgcgcccggatatttcgatcagttcggatttcatcgtc
ggcttccccggcgaaaccgaagcggacttcgaaaagaccatgaagctgatcgaggacgtg
ggcttcgaccagagcttttcgttcgtgtattcgcgtcgtcccggcaccccggcatcggac
ctgcaggacgacacgccggagacggtgaagcaggcgcgtcttgcacgtctgcaggcgcac
atcagcgcgcacgcggcgagcatttcgcaatcgatggtgggcagcgtgcagcgcgtgctg
gtggaaggcccctcgcggcgcgacccgaacgaattgaccggcaggagcgaaaacatgcgc
ccggtgaatttcccgggcaacccgcgtttgattgggcagttcgtggacgtgttgatcacc
gaggcgatgagcaattcgctgcgtggtcgcattcaactggacgacagcgcgcactga
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