Xanthomonas oryzae pv. oryzicola BLS256: XOC_2267
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Entry
XOC_2267 CDS
T01873
Symbol
rpfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00061
Fatty acid biosynthesis
xor00071
Fatty acid degradation
xor01100
Metabolic pathways
xor01212
Fatty acid metabolism
xor02024
Quorum sensing
xor04146
Peroxisome
Module
xor_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XOC_2267 (rpfB)
00071 Fatty acid degradation
XOC_2267 (rpfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XOC_2267 (rpfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
XOC_2267 (rpfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xor01004
]
XOC_2267 (rpfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xor04147
]
XOC_2267 (rpfB)
Enzymes [BR:
xor01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XOC_2267 (rpfB)
Lipid biosynthesis proteins [BR:
xor01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XOC_2267 (rpfB)
Exosome [BR:
xor04147
]
Exosomal proteins
Exosomal proteins of breast milk
XOC_2267 (rpfB)
Exosomal proteins of breast cancer cells
XOC_2267 (rpfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEQ96404
UniProt:
G7TEN9
LinkDB
All DBs
Position
complement(2261259..2262941)
Genome browser
AA seq
560 aa
AA seq
DB search
MNQARPWLQSYPAGVAADIDLEQFRTVAEVFATSVKRFADRPAYHSFGKTITYREADRLV
EQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLI
DSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAAVVNFVVKYVKKLVPDY
RINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQA
HQWVGGTGQLLEGQEVVITALPLYHIFALTANGLVFMKVGGCNHLISNPRDMPGFVKELK
KTRFTAFTGVNTLFNGLLNTPGFDQIDFSSLKMTLGGGMAVQRSVAERWKKVTGLTLVEA
YGLTETSPAACINPMTLTDYNGSIGLPIPSTDACIKDDAGTALAIGEIGELCIKGPQVMK
GYWKKADETAKVMDAEGWLHTGDIARMDEQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA
TMPGVLEVAAVGMPDEKSGEIVKAVIVKKDPALTADDVKAHCRANLTGYKQPRVIEFRKE
LPKTNVGKILRRELRDAPKT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggcacgtccttggttgcaaagttatccagccggcgttgccgccgacatcgat
cttgagcaattccgcacggtggccgaggtgttcgccacgtcggtaaaacgctttgccgac
cggcctgcgtatcacagcttcggcaagaccatcacttaccgcgaagcggatcggctggtc
gagcaattcgctgcttacctgcttggcgaactgcagttgaagaagggcgaccgcgtcgcc
ttgatgatgcccaactgcctgcagtatccaatcgcaaccttcggcgtcctgcgtgccggc
ctgaccgtggtcaacgtcaatccgctgtataccccgcgcgaactcaagcatcagttgatc
gactccggcgccagcgtgctggtggtcatcgacaatttcggtaccaccgtgcagcaggtc
attgccgacacgccggtcaagcaagtcatcaccaccggcctgggcgacatgctgggcttt
ccgaaggcggcggtggtcaacttcgttgtcaagtacgtcaagaagttggtgccggactac
cgcatcaacggtgcgatccgcttccgcgaggcgctggcgctaggccgcaagcacagcatg
ccgacgctgcagatcgagcccgacgacatcgcgttcctgcagtacaccggcggcaccacc
ggcgtggccaagggcgcgatgctgactcaccgcaatctggtcgccaatatgcagcaggcg
caccagtgggtcggtggcaccggccagctgttggaaggccaggaagtggtcatcactgcg
ctgccgctgtatcacatcttcgcattgacggcgaatggcctggtcttcatgaaggttggc
ggctgcaatcacctgatcagcaacccgcgcgacatgcccggcttcgtcaaggagctgaaa
aagacccgcttcaccgcgttcactggcgtcaacacgctgttcaacggcctgctcaataca
cccggtttcgatcagatcgatttttcctcgctcaagatgaccctgggcggcggcatggcc
gtgcagcgctcggtcgccgaacgctggaagaaggtcaccggcctgaccctggtcgaggcg
tacggcctgaccgaaacctcaccggccgcctgcatcaacccgatgaccctgacggactac
aacggctcgatcggcctgccgattccgtccaccgatgcctgcatcaaggacgacgccggc
acggcgttggcgatcggcgagatcggcgagttgtgcatcaagggcccgcaggtgatgaag
ggctattggaagaaggccgacgagaccgccaaggtgatggatgccgaaggctggctgcac
actggcgacatcgcccgcatggacgagcaaggcttcgtctacatcgtcgatcgcaaaaag
gacatgattctggtgtccggcttcaacgtctatccgaacgagatcgaagacgtgatcgcc
accatgcccggcgtgctggaagtggcagcggtcggcatgccggacgaaaagtccggcgag
atcgtcaaggcggtcatcgtgaagaaggaccctgccctgaccgccgacgatgtgaaggcg
cattgccgcgccaacctcaccggatacaagcagccgcgggtgatcgaatttcggaaggaa
ttgcccaagaccaatgttggcaagatcctgcgccgtgaattgcgggacgcgccgaaaacg
taa
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