Xanthomonas oryzae pv. oryzicola BLS256: XOC_2270
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Entry
XOC_2270 CDS
T01873
Symbol
rpfA
Name
(GenBank) aconitate hydratase 1
KO
K27802
aconitate hydratase A / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor00020
Citrate cycle (TCA cycle)
xor00630
Glyoxylate and dicarboxylate metabolism
xor00640
Propanoate metabolism
xor00720
Other carbon fixation pathways
xor01100
Metabolic pathways
xor01120
Microbial metabolism in diverse environments
xor01200
Carbon metabolism
xor01210
2-Oxocarboxylic acid metabolism
xor01230
Biosynthesis of amino acids
Module
xor_M00009
Citrate cycle (TCA cycle, Krebs cycle)
xor_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
xor_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
XOC_2270 (rpfA)
00630 Glyoxylate and dicarboxylate metabolism
XOC_2270 (rpfA)
00640 Propanoate metabolism
XOC_2270 (rpfA)
09102 Energy metabolism
00720 Other carbon fixation pathways
XOC_2270 (rpfA)
Enzymes [BR:
xor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
XOC_2270 (rpfA)
4.2.1.99 2-methylisocitrate dehydratase
XOC_2270 (rpfA)
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Gene cluster
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Motif
Pfam:
Aconitase
Aconitase_C
Motif
Other DBs
NCBI-ProteinID:
AEQ96407
UniProt:
G7TEP2
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All DBs
Position
complement(2263591..2266359)
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AA seq
922 aa
AA seq
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MSDSFSTRTWLEVHGKRYAYYSLPKLGERFDIGHLPYSMKILLENLLRHEDGGVTVGRDH
IEAVARWDPKAEPDIEIAFMPARVVLQDFTGVPCVVDLAAMRDAVVTLGGNADQINPQIP
SELVIDHSVQVDVFGKPDALDLNGKIEFQRNQERYGFLRWGQKAFENFKVVPPNTGIVHQ
VNLENLARVVMSADKDGTLLAYPDTVFGTDSHTTMINGIGVLGWGVGGIEAEAAMLGQPS
SMLIPQVVGFKLSGKLPEGATATDLVLTVTQMLRKAGVVGKFVEFHGDGLQHLPLADRAT
IGNMAPEYGATCGIFPVDAESLTYLRLSGRSEEQIALVEAYAKAQGLWHDANTPPAQYSA
TLELDMAEVKPSLAGPKRPQDRVLLEDMQSNYRESLKPFADARSKKLTDLTQGDRLKNEG
GGGTAVGAKASQAESAGASGAGWQLRDGSVVIAAITSCTNTSNPAVMLGAGLLARHAAAK
GLKAQPWVKTSLGPGSRVVTDYLSKAGVLADLEKLGFYVVGYGCTTCIGNSGPLPDDVSA
AIAKDDLVVTSVLSGNRNFEGRVHPEVKMNYLASPPLVVAYAIAGTADIDLTTEPLGTGS
DGQPVYLRDIWPSNKEIGDTIAATVGPEMFKQNYADVFKGDTRWNTIASPDGALYEWDAA
STYIKNPPYFDGMTMQVGHVDDVHGARIMGLFGDSITTDHISPAGNIKKDSPAGRFLQER
GVQPADFNSYGSRRGNDDVMVRGTFANIRIKNLMFGGEEGGNTLYYPADGSQPEKLAIYD
AAMKYKADGVPLVVLAGKEYGTGSSRDWAAKGTNLLGVKAVIAESFERIHRSNLVGMGVL
PLQFLDNENAQSLGLDGSEVLDITGLQDGTSRRATVDAKKSDGSVKQFQVKVLLLTPKEV
EYFKHGGLLQYVLRQLAARKAA
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattccttttccactcgcacctggcttgaggtccacggcaagcgctacgcctac
tacagcctgccgaagctgggcgaacgcttcgacatcggccacctgccctattcgatgaag
atcctgctggagaacctgctccggcatgaggacggcggtgtcaccgtcggcagggatcat
atcgaagcggtcgccaggtgggacccgaaggccgagcccgatatcgaaatcgccttcatg
ccggcgcgcgtggtgctgcaggactttaccggcgtgccctgcgtggtcgacctggccgcg
atgcgcgacgcggtagtcacactcggcggcaacgccgaccagatcaacccgcagattcct
tccgaactggtcatcgaccattcggtgcaggtggacgtgttcggcaagcccgacgcgctc
gacctcaacggcaagatcgaatttcagcgcaatcaggaacgctacggctttctgcgctgg
ggccagaaggcgttcgagaacttcaaggtggtgccgcccaacaccggcatcgtgcatcag
gtgaacctggaaaacctggcgcgcgtggtgatgagcgcggacaaggacggcaccttgctc
gcctaccccgacaccgtgttcggcaccgacagccacaccaccatgatcaatggcatcggc
gtgctgggttggggcgtgggcggcatcgaggcagaggccgcgatgctgggccagccctcc
tcgatgctgattccgcaggtggtcggcttcaagctcagcggcaagctacccgaaggcgcc
accgccaccgatctggtgctcaccgtcacccagatgctgcgcaaggccggcgtggtcggc
aagttcgtcgagttccatggcgacggcctgcagcacctgccgctggccgaccgcgccacc
atcggcaatatggctcccgaatacggcgccacctgcggcatcttcccggtagacgccgaa
tcgctgacctacctgcgcctgtccggccgcagcgaggagcagattgcgctggtcgaggcc
tatgccaaggcgcaaggcctgtggcacgacgccaacaccccgccggcgcagtacagcgcc
acgctggaactggacatggccgaggtcaagccgtcgctggccggccccaagcgcccacag
gaccgcgtgctgctggaagacatgcagtccaactaccgcgaaagcctcaagccgtttgcc
gacgcacgcagcaagaagctcaccgacctcacgcagggagaccgcctgaagaacgaaggc
ggcggcggcactgcggtgggcgccaaggcgtcccaggcagaaagcgccggtgccagcggc
gccggttggcagctgcgcgatggctcggtggtcatcgccgcaatcacgtcgtgcaccaac
acctccaacccggcagtgatgttgggtgccggcctgcttgcgcgtcatgcggcagccaag
ggtctgaaagcgcagccatgggtgaagacctcgctcgggccgggctcgcgcgtggtcacc
gattacctgagcaaggccggcgtgctcgccgacctggaaaaactgggtttctacgtggtc
ggctacggctgcaccacctgcatcggcaactccggcccgctgccggacgacgtgtctgcg
gcgattgccaaggacgatctggtggtgacctcggtgctgtcgggcaaccgcaacttcgaa
ggccgcgtacatcccgaagtcaaaatgaattacctggcctcgccgccgctggtggtggcc
tacgccatcgccggcaccgccgatatcgacctcaccaccgagccgctgggcaccggtagc
gacgggcagccggtctatctgcgcgacatctggccgagcaacaaggaaatcggcgacacc
atcgccgccaccgtcggcccggagatgttcaagcagaactacgccgacgtgttcaagggc
gacacgcgctggaacaccatcgcctcgcccgacggcgcgctgtacgagtgggacgccgcc
tcgacctacatcaagaacccgccctacttcgacggcatgaccatgcaggtgggccatgtg
gacgacgtgcacggtgcgcgcatcatgggcctgttcggcgactcgatcaccaccgaccac
atctcgcctgccggcaacatcaaaaaggactcgccggcaggccgtttcctgcaggaacgc
ggcgtgcaaccggccgacttcaacagctacggcagccgccgcggcaacgacgatgtgatg
gtacgcggcacgttcgccaacatccgcatcaagaacctgatgttcggcggcgaagaaggc
ggcaacacgctgtactacccggccgacggcagccagccggaaaagctggcgatctacgat
gccgccatgaagtacaaggccgacggcgtaccgctggtggtgctggcgggcaaggaatac
ggcaccggctcctcgcgcgactgggcggccaagggcaccaacctgctcggcgtcaaggcc
gtgatcgccgagagcttcgagcgcatccaccgttccaacctggtcggcatgggcgtactg
ccgctgcagttcctggacaacgagaacgcgcaaagccttggcctggatggctcggaagtg
ctggacatcaccggcctgcaggacggcaccagccgccgtgccacggtggatgccaaaaag
tccgatggcagcgtcaaacagttccaggtcaaggtgctgctgctgacgccgaaggaagtg
gagtacttcaagcacggtggtctgctgcagtacgtgctgcgtcaactggctgcgcgcaag
gcagcctga
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