Xanthomonas oryzae pv. oryzicola BLS256: XOC_2790
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Entry
XOC_2790 CDS
T01873
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xor03016
]
XOC_2790 (truD)
Enzymes [BR:
xor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
XOC_2790 (truD)
Transfer RNA biogenesis [BR:
xor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XOC_2790 (truD)
Prokaryotic type
XOC_2790 (truD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEQ96897
UniProt:
G7TJ78
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All DBs
Position
complement(2857627..2858736)
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AA seq
369 aa
AA seq
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MSETSLLPRAHGAAVLSAAMRSTPDDFQVDELPAFEPSGEGEHLLLTVRKRGQNTAYIAK
KLAHWAGIAEMGVGYAGLKDRHAVTTQRFSVHLPKRIAPDIAALDDAQMQVIDSTWHNRK
LQRGALHGNGFVLTLRQVHGERDAVEERLQAIAARGIPNWVGEQRFGRDGGNVAAALAMF
GYVQAADGTLAPAPTSRRRLRNDQRSMLLSAARSALFNRVLTARVEQDSWDSALEGEAWL
LDGSRSVFGPEPWSDALAERLARFDIHPSGPLWGAGALRSTDQAAAVEQGALSDPQSEAL
RQGLEAGGLKQERRALRLRPQGLDYRWLEAQTLQLEFALPPGCYATAVLWELGEVTDAGR
FDAGVRSDE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagacctctctgctgccacgtgcacatggcgctgccgtgctcagcgcggcgatg
cgcagcacgccggacgactttcaggtcgacgaactgccggcgttcgagccttctggcgaa
ggtgagcatttgctgctcaccgtgcgcaagcgtggccagaacaccgcctacatcgccaag
aagctcgcgcactgggcgggcatcgccgagatgggcgtcggctatgctggcctgaaagat
cgccacgccgtgaccacccagcgcttcagcgtgcatctgcccaagcgcatcgcgccggat
atcgcagcgctggatgatgcgcagatgcaggtgatcgatagcacctggcacaaccgcaag
ctgcaacgcggtgcgctgcacgggaacggttttgtgttgacgctgcgccaggtacacggc
gagcgcgatgcagtcgaggaacggttgcaggcgattgctgcgcgcggcatccccaactgg
gtcggcgaacaacgcttcggtcgcgatggcggcaacgtggcggctgcgttggcgatgttc
ggctatgtgcaggctgccgatggaacactggcgccggcaccaacctccaggcggcggctg
cgcaacgatcagcgctcgatgctgctgtcggcggcacgctcggccttgttcaatcgcgtc
ctcaccgcacgtgtggagcaggacagttgggacagtgcgctggaaggcgaggcgtggctg
ctggatggctcgcgcagcgtcttcggcccggagccgtggagcgatgcgctggcagagcgg
ctggcgcgtttcgatatccaccccagcggcccgttgtggggcgcgggcgcgttgcgctcg
accgatcaggcggcagcagtggagcagggcgccttgtccgatccgcaatccgaagcgctg
cgccagggtctggaagcagggggattgaagcaggagcgccgtgcgctgcgcttgcgtccg
caaggtctggactatcgatggctggaggcgcagaccctgcaactggagttcgcgctgccg
cctggctgttatgccactgcggtgctgtgggaattgggtgaggtcaccgacgcaggccgt
ttcgacgccggtgtgcgctctgacgagtga
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