Xanthomonas oryzae pv. oryzicola BLS256: XOC_3173
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Entry
XOC_3173 CDS
T01873
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_3173
Enzymes [BR:
xor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
XOC_3173
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
XOC_3173
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AEQ97271
UniProt:
G7TAX0
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All DBs
Position
complement(3232925..3234502)
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AA seq
525 aa
AA seq
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MHDSSAPTAQTTQQTPAHTLRLILGDQLNPQHSWFATRDAGVVYVLMEVRQETDYVLHHA
QKVLAIFAAMRAFAAGLRRDGHRVRYVTIDNASNRQSIPHNLEALMAHYRADRLDYQAPD
EWRLDEALQHWSAAQPFATRMVDSEHFLTARNEVAACFRAGSPWRMDVFYRRMRRQHRIL
LDAAGEPEGGRWNFDHDNRAPWPGDPPAPRDWRAMHDHSALWRTIKAAGVRSFGAPNAQA
LPWPVDREEALQHLDAFIADALPDFGRYEDAMSTRSPRLFHSLLSFALNVKMLHPREVIA
RAEAAWRQRHAPLAAVEGFIRQILGWREYVRGVYWSQMPGYADLNHLDQHAPLPHWFWDG
QIGMRCLADAVGNSLANAHAHHIQRLMVIGNFALLAGLAPQALHRWYLGVYIDAFEWVEL
PNTVGMSQFADGGLLGSKPYISGAAYIDRMSDYCSGCRYQRKLRVGANACPYNALYWDFL
QRQRPLLGANERLALPYRQLDGMAPEVLAEVQAQAAHWRSHLEAL
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgcatgattccagcgcgcccacagcgcagaccacccagcaaacgccggcccatacgctg
cgtctgattctgggcgaccagctcaatccacaacacagctggtttgcgacgcgcgatgcg
ggcgtggtctatgtgttgatggaagtgcggcaggaaaccgactacgtgctgcatcacgcg
cagaaggtcctggcgatcttcgcggccatgcgtgccttcgctgcaggtttgcggcgggac
gggcatcgggtgcgctatgtgacgatcgacaatgccagcaaccggcagtcgatcccgcac
aacctcgaggcgttgatggcgcattaccgggccgaccggttggactaccaggccccggac
gagtggcggctggacgaagcgctgcagcactggagcgcggcgcagccctttgccacgcgc
atggtcgacagcgaacattttctgaccgcgcgcaatgaagtcgccgcctgttttcgcgcc
ggcagcccgtggcgcatggacgtgttttatcggcgcatgcggcgccagcatcggatcctg
ctcgatgccgccggcgaaccggaaggcgggcgctggaacttcgatcacgacaatcgtgcg
ccgtggccgggcgacccacctgcgccacgggattggcgcgcaatgcacgatcacagcgcg
ctgtggcgcacgatcaaagccgccggcgtgcgcagttttggcgcgccgaatgcgcaagct
ctgccatggccggtcgatcgcgaggaagccttgcagcatctggatgcattcatcgcagac
gccttgccggatttcggccgctacgaagatgcgatgagcacgcgcagcccgcgcctgttt
cattcgctgctgtcgtttgcgctcaacgtcaagatgctgcatccgcgcgaagtgatcgcg
cgtgccgaagcggcatggcggcaacggcatgcgccgttggcggcggtggaaggcttcatc
cgccagattctggggtggcgcgaatacgtgcgcggtgtgtactggtcgcagatgcccggc
tacgcggatttgaatcacctcgatcagcatgcacccctgccgcactggttctgggatggg
cagatcggcatgcgctgcctggccgatgcggtcggtaattccctggccaacgcgcatgcg
catcacatccagcggctgatggtgatcggcaattttgcgctgctggcggggctggccccg
caggcgctgcatcgctggtacttgggcgtgtacatcgacgccttcgagtgggtggagctg
cccaatacggtcggcatgagtcagttcgccgatggcggcctgctgggcagcaagccgtat
atcagcggcgcggcctatatcgatcgcatgagcgattactgcagtggctgccggtaccag
cgcaagctgcgggtcggcgcgaacgcgtgcccgtacaacgcgttgtactgggatttcctg
cagcgccagcgtccgctgttgggcgccaacgaacgcctggcactgccgtatcgccagctc
gatggcatggcccccgaggtgttggctgaggtgcaggcccaggccgcgcattggcggtcc
catctcgaggcactgtga
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