Xanthomonas oryzae pv. oryzicola BLS256: XOC_3180
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Entry
XOC_3180 CDS
T01873
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
xor
Xanthomonas oryzae pv. oryzicola BLS256
Pathway
xor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XOC_3180 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xor03400
]
XOC_3180 (recO)
DNA repair and recombination proteins [BR:
xor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
XOC_3180 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
XOC_3180 (recO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RecO_N
RecO_C
RecO_N_2
Motif
Other DBs
NCBI-ProteinID:
AEQ97278
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Position
complement(3239677..3240399)
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AA seq
240 aa
AA seq
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MLIKHERGFVLHVRAWRETSLLVEVLTEQHGRVGLLARGVHGPRKQALRAALQPLQLIQF
SAVQRGELAQLRQAEALDTAPRLVGDTMLAGFYISELLLRLAPRNDPVPELYACYAQART
HLAADLPLAWGLRRFERDVLEGLGFAFDLQHDSDGQPIDPAARYRLDPQEGALRVLSERL
SQDRRETVTGAALLALGEDVMPAADDMPGLRRSMRSVLLHHLGGRGLKSWEMLEDLARRR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcaagcacgaacgcgggttcgtcctgcacgtgcgggcctggcgcgagaccagc
ctgctggtggaggtattgaccgagcagcacgggcgggtggggctgttggcgcgcggagtc
catgggccgcgcaagcaggccttgcgtgctgccttgcagccattgcagttgattcagttc
agcgccgtgcagcgcggcgagctggcccaactgcgtcaggctgaagcgctggatactgcg
cctcggctggtcggcgacaccatgctggccggtttctatatcagcgaattgttgctgcgc
ctggcaccgcgcaacgatccggtgcccgaactctatgcctgttatgcgcaggcgcggacg
cacctggcagccgatcttccgttggcatgggggttgcgtcggttcgagcgcgacgtgctg
gaagggctggggtttgccttcgatctgcagcacgacagcgacgggcaaccgatcgacccg
gcagcgcggtatcggctggatccgcaggagggcgccttgcgtgtgttaagcgagcggctt
tcgcaggatcgccgcgaaaccgtcaccggtgcggcgctgctggcactgggtgaggacgtc
atgccagccgcagacgatatgcctggtctgcggcgcagcatgcgcagtgtgctgctgcat
catctgggtgggcgcggattgaaatcctgggaaatgcttgaggatctggcacggcgtcgt
tga
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